Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40542584 . C A CCDS447.1:NM_000310.3:c.728tGg>tTg_NP_000301.1:p.243W>L Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 TRP A:223 A:243 71.0 0.278 G -113.0 24.5 71.0 0.278 0.0 HOH
 2.684
 O
 O
TRP B:223 B:243 62.0 0.243 G -115.1 28.6 62.0 0.243 0.0 HOH
 4.921
 N
 O
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 TRP A:216 A:243 73.0 0.286 G -113.0 20.1 73.0 0.286 0.0 HOH
 2.741
 O
 O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 TRP A:216 A:243 78.0 0.306 G -113.8 25.6 78.0 0.306 0.0 HOH
 2.724
 O
 O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 TRP A:216 A:243 71.0 0.278 G -115.7 29.1 71.0 0.278 0.0 HOH
 4.793
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 TRP A:243 A:243 75.0 0.294 G -112.7 26.9