Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40544245 . G A CCDS447.1:NM_000310.3:c.713cCt>cTt_NP_000301.1:p.238P>L Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 PRO A:218 A:238 6.0 0.041 S -86.9 153.6 6.0 0.041 0.0 HOH
 9.507
 O
 O
PRO B:218 B:238 7.0 0.048 S -88.0 149.0 7.0 0.048 0.0 HOH
 5.536
 N
 O
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 PRO A:211 A:238 5.0 0.034 S -86.0 156.2 5.0 0.034 0.0 PLM
HOH
 9.198
5.585
 N
N
 C5
O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 PRO A:211 A:238 5.0 0.034 S -87.8 142.8 5.0 0.034 0.0 HOH
 5.668
 N
 O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 PRO A:211 A:238 4.0 0.028 S -91.8 152.4 4.0 0.028 0.0 HDS
HOH
 8.290
3.824
 N
CA
 C4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 PRO A:238 A:238 4.0 0.028 S -85.6 148.5