Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40544251 . A C CCDS447.1:NM_000310.3:c.707gTg>gGg_NP_000301.1:p.236V>G Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 VAL A:216 A:236 10.0 0.065 S -94.5 126.7 10.0 0.065 0.0 UNX
HOH
 9.774
6.556
 C
CG2
 UNK
O
VAL B:216 B:236 9.0 0.058 S -92.1 117.3 9.0 0.058 0.0 HOH
 3.577
 CA
 O
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 VAL A:209 A:236 7.0 0.045 S -97.5 111.9 7.0 0.045 0.0 NAG
PLM
HOH
 9.849
5.109
3.509
 O
CG2
CA
 O6
C3
O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 VAL A:209 A:236 9.0 0.058 S -91.1 119.5 9.0 0.058 0.0 HOH
 3.668
 CA
 O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 VAL A:209 A:236 9.0 0.058 S -96.4 113.8 9.0 0.058 0.0 NAG
HDS
HOH
 9.412
3.975
3.307
 O
CG2
O
 O6
C3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 VAL A:236 A:236 7.0 0.045 S -87.6 119.8