Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40544293 . A C CCDS447.1:NM_000310.3:c.665cTg>cGg_NP_000301.1:p.222L>R Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 LEU A:202 A:222 4.0 0.024 -65.5 135.5 4.0 0.024 0.0 HOH
 9.826
 O
 O
LEU B:202 B:222 4.0 0.024 -68.2 144.3 4.0 0.024 0.0
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 LEU A:195 A:222 4.0 0.024 -68.5 154.3 4.0 0.024 0.0 HOH
 3.015
 O
 O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 LEU A:195 A:222 6.0 0.035 S -62.2 162.9 6.0 0.035 0.0 HOH
 4.016
 CA
 O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 LEU A:195 A:222 3.0 0.018 -73.7 159.7 3.0 0.018 0.0 HOH
 3.885
 CA
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 LEU A:222 A:222 2.0 0.012 -63.3 137.5