Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40546130 . G A CCDS447.1:NM_000310.3:c.566cCc>cTc_NP_000301.1:p.189P>L Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 PRO A:169 A:189 0.0 0.0 S -78.9 -19.8 0.0 0.0 0.0 UNX
HOH
 8.233
9.122
 CD
CA
 UNK
O
PRO B:169 B:189 1.0 0.007 S -80.1 -26.1 1.0 0.007 0.0
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 PRO A:162 A:189 0.0 0.0 S -81.4 -26.0 0.0 0.0 0.0 HOH
 6.423
 CB
 O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 PRO A:162 A:189 0.0 0.0 S -78.5 -29.1 0.0 0.0 0.0 HOH
 4.185
 CB
 O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 PRO A:162 A:189 0.0 0.0 S -74.9 -28.3 0.0 0.0 0.0 HOH
 6.560
 CD
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 PRO A:189 A:189 1.0 0.007 S -74.4 -14.6