Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40546136 . T A CCDS447.1:NM_000310.3:c.560cAt>cTt_NP_000301.1:p.187H>L Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
2009-04-07 HIS A:167 A:187 4.0 0.021 -128.1 98.8 4.0 0.021 0.0 UNX
HOH
7.538
3.646
C
CE1
UNK
O
HIS B:167 B:187 4.0 0.021 -132.7 98.9 4.0 0.021 0.0 HOH
8.890
N
O
1eh5 1 P45478 94.24 0.0 X-RAY
2000-04-26 HIS A:160 A:187 3.0 0.015 -122.1 102.4 3.0 0.015 0.0 PLM
HOH
8.121
3.588
N
CE1
CB
O
1ei9 1 P45478 94.24 0.0 X-RAY
2000-04-26 HIS A:160 A:187 4.0 0.021 -122.0 105.1 4.0 0.021 0.0 HOH
3.711
CE1
O
1exw 1 P45478 94.24 0.0 X-RAY
2000-08-02 HIS A:160 A:187 3.0 0.015 -120.9 101.2 3.0 0.015 0.0 HDS
HOH
7.856
3.577
N
CE1
C11
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 HIS A:187 A:187 5.0 0.026 -123.1 102.2