Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 40546138 | . | C | A | CCDS447.1:NM_000310.3:c.558tgG>tgT_NP_000301.1:p.186W>C | Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 3gro | 1 | P50897 | 99.65 | 0.0 |
X-RAY |
2009-04-07 | TRP | A:166 | A:186 | 9.0 | 0.035 | B | -72.0 | 122.4 | 9.0 | 0.035 | 0.0 |
UNX UNX HOH |
5.292 3.799 2.745 |
CH2 NE1 O |
UNK UNK O |
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| TRP | B:166 | B:186 | 7.0 | 0.027 | B | -71.6 | 131.3 | 7.0 | 0.027 | 0.0 |
HOH |
6.215 |
CZ3 |
O |
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| 1eh5 | 1 | P45478 | 94.24 | 0.0 |
X-RAY |
2000-04-26 | TRP | A:159 | A:186 | 19.0 | 0.075 | B | -82.6 | 125.7 | 19.0 | 0.075 | 0.0 |
PLM HOH |
3.760 2.736 |
CE3 O |
CB O |
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| 1ei9 | 1 | P45478 | 94.24 | 0.0 |
X-RAY |
2000-04-26 | TRP | A:159 | A:186 | 24.0 | 0.094 | B | -75.8 | 125.9 | 24.0 | 0.094 | 0.0 |
HOH |
2.879 |
O |
O |
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| 1exw | 1 | P45478 | 94.24 | 0.0 |
X-RAY |
2000-08-02 | TRP | A:159 | A:186 | 23.0 | 0.09 | B | -82.9 | 124.3 | 23.0 | 0.09 | 0.0 |
HDS HOH |
3.304 2.833 |
CE3 O |
C11 O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p50897-f1 | 1 | P50897 | 100.0 | 0.0 | TRP | A:186 | A:186 | 17.0 | 0.067 | B | -71.3 | 122.4 | |