Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40546146 . C A CCDS447.1:NM_000310.3:c.550Gaa>Taa_NP_000301.1:p.184E>* Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
2009-04-07 GLU A:164 A:184 0.0 0.0 G -80.6 -10.0 0.0 0.0 0.0 HOH
3.210
C
O
GLU B:164 B:184 0.0 0.0 H -73.6 -14.7 0.0 0.0 0.0
1eh5 1 P45478 94.24 0.0 X-RAY
2000-04-26 GLU A:157 A:184 0.0 0.0 G -65.4 -13.2 0.0 0.0 0.0 PLM
HOH
6.821
3.103
N
O
CD
O
1ei9 1 P45478 94.24 0.0 X-RAY
2000-04-26 GLU A:157 A:184 0.0 0.0 G -68.8 -11.5 0.0 0.0 0.0 HOH
3.204
O
O
1exw 1 P45478 94.24 0.0 X-RAY
2000-08-02 GLU A:157 A:184 0.0 0.0 G -70.7 -3.0 0.0 0.0 0.0 HDS
HOH
6.698
3.378
N
C
C12
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 GLU A:184 A:184 0.0 0.0 H -66.1 -21.4