Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40555162 . G A CCDS447.1:NM_000310.3:c.456tgC>tgT_NP_000301.1:p.152C>C Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 CYS A:132 A:152 9.0 0.067 -100.9 145.8 9.0 0.067 0.0 UNX
HOH
 9.599
7.903
 N
CA
 UNK
O
CYS B:132 B:152 9.0 0.067 -112.0 145.8 9.0 0.067 0.0 HOH
 7.779
 CA
 O
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 CYS A:125 A:152 32.0 0.237 -138.8 55.6 32.0 0.237 0.0 PLM
HOH
 9.955
4.002
 CB
O
 C8
O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 CYS A:125 A:152 33.0 0.244 -123.6 62.6 33.0 0.244 0.0 HOH
 3.648
 O
 O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 CYS A:125 A:152 31.0 0.23 -122.6 64.0 31.0 0.23 0.0 HDS
HOH
 9.469
3.142
 CB
O
 C9
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 CYS A:152 A:152 8.0 0.059 -134.5 138.2