Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40555167 . G A CCDS447.1:NM_000310.3:c.451Cga>Tga_NP_000301.1:p.151R>* Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
2009-04-07 ARG A:131 A:151 107.0 0.476 -164.2 136.8 107.0 0.476 0.0 UNX
HOH
6.759
8.028
N
O
UNK
O
ARG B:131 B:151 99.0 0.44 -159.5 141.3 99.0 0.44 0.0 UNX
UNX
HOH
8.789
6.453
6.183
NH2
NE
O
UNK
UNK
O
1eh5 1 P45478 94.24 0.0 X-RAY
2000-04-26 ARG A:124 A:151 183.0 0.813 T 47.1 41.1 183.0 0.813 0.0 PLM
HOH
8.211
6.897
N
N
C6
O
1ei9 1 P45478 94.24 0.0 X-RAY
2000-04-26 ARG A:124 A:151 170.0 0.756 T 63.4 21.0 170.0 0.756 0.0 HOH
2.438
N
O
1exw 1 P45478 94.24 0.0 X-RAY
2000-08-02 ARG A:124 A:151 172.0 0.764 T 63.7 20.1 172.0 0.764 0.0 HDS
HOH
8.273
4.022
N
N
C5
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 ARG A:151 A:151 115.0 0.511 -137.2 161.2