Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40557018 . A C CCDS447.1:NM_000310.3:c.416gTt>gGt_NP_000301.1:p.139V>G Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 VAL A:119 A:139 1.0 0.006 E -108.2 95.1 1.0 0.006 0.0 HOH
 4.233
 N
 O
VAL B:119 B:139 0.0 0.0 E -101.5 88.4 0.0 0.0 0.0 HOH
 4.420
 N
 O
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 VAL A:112 A:139 10.0 0.065 E -97.5 94.9 10.0 0.065 0.0 PLM
HOH
 7.072
4.823
 O
N
 C1
O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 VAL A:112 A:139 7.0 0.045 E -102.7 91.6 7.0 0.045 0.0 HOH
 4.518
 N
 O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 VAL A:112 A:139 2.0 0.013 E -98.1 91.4 2.0 0.013 0.0 HDS
HOH
 7.308
4.567
 O
C
 S1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 VAL A:139 A:139 1.0 0.006 E -101.3 96.4