Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40557749 . A C CCDS447.1:NM_000310.3:c.330aaT>aaG_NP_000301.1:p.110N>K Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 ASN A:90 A:110 4.0 0.025 E -97.4 148.5 4.0 0.025 0.0 HOH
 8.494
 N
 O
ASN B:90 B:110 3.0 0.019 E -90.6 150.3 3.0 0.019 0.0
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 ASN A:83 A:110 2.0 0.013 E -98.8 164.6 2.0 0.013 0.0 HOH
 7.729
 OD1
 O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 ASN A:83 A:110 4.0 0.025 E -90.1 152.6 4.0 0.025 0.0 HOH
 2.541
 ND2
 O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 ASN A:83 A:110 4.0 0.025 E -85.2 155.8 4.0 0.025 0.0 HOH
 2.618
 ND2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 ASN A:110 A:110 1.0 0.006 E -84.8 151.4