Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40557843 . T A CCDS447.1:NM_000310.3:c.236gAc>gTc_NP_000301.1:p.79D>V Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 ASP A:59 A:79 2.0 0.013 H -56.4 -44.9 2.0 0.013 0.0 HOH
 4.872
 OD1
 O
ASP B:59 B:79 1.0 0.007 H -58.1 -51.5 1.0 0.007 0.0 HOH
 9.423
 OD2
 O
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 ASP A:52 A:79 1.0 0.007 H -70.1 -52.1 1.0 0.007 0.0 HOH
 2.692
 OD1
 O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 ASP A:52 A:79 1.0 0.007 H -64.8 -44.5 1.0 0.007 0.0 HOH
 2.654
 O
 O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 ASP A:52 A:79 1.0 0.007 H -65.8 -53.2 1.0 0.007 0.0 HOH
 2.755
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 ASP A:79 A:79 1.0 0.007 H -59.6 -47.7