Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40562794 . A C CCDS447.1:NM_000310.3:c.117caT>caG_NP_000301.1:p.39H>Q Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
 2009-04-07 HIS A:19 A:39 3.0 0.015 -70.3 168.8 3.0 0.015 0.0 HOH
 3.666
 C
 O
HIS B:19 B:39 2.0 0.01 -64.8 171.2 2.0 0.01 0.0 HOH
 3.685
 C
 O
1eh5 1 P45478 94.24 0.0 X-RAY
 2000-04-26 HIS A:12 A:39 3.0 0.015 -69.2 164.5 3.0 0.015 0.0 PLM
HOH
 6.243
2.667
 C
O
 O1
O
1ei9 1 P45478 94.24 0.0 X-RAY
 2000-04-26 HIS A:12 A:39 4.0 0.021 -68.4 169.8 4.0 0.021 0.0 HOH
 2.968
 O
 O
1exw 1 P45478 94.24 0.0 X-RAY
 2000-08-02 HIS A:12 A:39 3.0 0.015 -67.5 167.4 3.0 0.015 0.0 HDS
HOH
 5.826
3.094
 O
CE1
 O1S
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 HIS A:39 A:39 3.0 0.015 -70.1 168.6