Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 40562828 . T A CCDS447.1:NM_000310.3:c.83gAc>gTc_NP_000301.1:p.28D>V Homo sapiens palmitoyl-protein thioesterase 1 (PPT1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3gro 1 P50897 99.65 0.0 X-RAY
2009-04-07 ASP A:8 NA:NA DO NA DO DO DO NA NA NA
ASP B:8 NA:NA DO NA DO DO DO NA NA NA
1eh5 1 P45478 94.24 0.0 X-RAY
2000-04-26 ASP A:1 A:28 180.0 1.0 360.0 168.9 180.0 1.0 0.0 HOH
8.456
O
O
1ei9 1 P45478 94.24 0.0 X-RAY
2000-04-26 ASP A:1 A:28 167.0 1.0 360.0 155.2 167.0 1.0 0.0 HOH
7.036
O
O
1exw 1 P45478 94.24 0.0 X-RAY
2000-08-02 ASP A:1 A:28 161.0 1.0 360.0 142.0 161.0 1.0 0.0 HOH
7.594
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50897-f1 1 P50897 100.0 0.0 ASP A:28 A:28 139.0 0.927 -47.6 135.6