Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 52385693 | . | T | A | CCDS560.1:NM_002867.3:c.566gAt>gTt_NP_002858.2:p.189D>V | Homo sapiens RAB3B, member RAS oncogene family (RAB3B), mRNA. |
|---|---|---|---|---|---|---|---|
|
|
|
|
|
PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 6y7g | 1 | Q96E17 | 80.82 | 1e-136 |
X-RAY |
2021-03-31 | GLU | A:197 | A:197 | 178.0 | 0.937 | -79.8 | 360.0 | 178.0 | 0.937 | 0.0 |
HOH |
9.568 |
O |
O |
|||
| GLU | B:197 | B:197 | 164.0 | 0.863 | -101.7 | 360.0 | NA | NA | NA | ||||||||||||||
| 3dz8 | 1 | P20337 | 100.0 | 1e-129 |
X-RAY |
2008-08-12 | ASP | A:190 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 1zbd | 1 | P63012 | 80.1 | 4e-118 |
X-RAY |
1999-04-02 | GLU | A:175 | A:189 | 135.0 | 0.711 | H | -78.8 | -25.0 | 135.0 | 0.711 | 0.0 | ||||||
| 4rkf | 1 | P25228 | 81.48 | 7e-113 |
X-RAY |
2014-12-10 | GLU | A:190 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| GLU | B:190 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 2gf9 | 1 | O95716 | 85.88 | 1e-110 |
X-RAY |
2006-05-02 | GLU | A:189 | A:189 | 197.0 | NA | -57.1 | 360.0 | 197.0 | NA | NA |
HOH |
2.396 |
OE2 |
O |
|||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p20337-f1 | 1 | P20337 | 100.0 | 1e-166 | ASP | A:189 | A:189 | 88.0 | 0.587 | H | -57.2 | -34.9 | |
| af-q96e17-f1 | 1 | Q96E17 | 80.82 | 5e-137 | GLU | A:197 | A:197 | 97.0 | 0.511 | H | -56.7 | -39.1 | |