Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 53675705 . A C CCDS575.1:NM_000098.2:c.359tAc>tCc_NP_000089.1:p.120Y>S Homo sapiens carnitine palmitoyltransferase 2 (CPT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4eyw 1 P18886 84.02 0.0 X-RAY
 2013-04-24 TYR A:96 A:120 52.0 0.226 H -75.8 -36.1 52.0 0.226 0.0 HOH
 2.817
 O
 O
TYR B:96 B:120 33.0 0.143 H -61.8 -44.7 NA NA NA
2deb 1 P18886 84.02 0.0 X-RAY
 2007-02-10 TYR A:115 A:120 69.0 0.3 H -77.7 -33.0 69.0 0.3 0.0 HOH
 2.721
 O
 O
TYR B:115 B:120 51.0 0.222 H -73.8 -36.3 NA NA NA
2fw3 1 P18886 84.02 0.0 X-RAY
 2007-02-01 TYR A:115 A:120 16.0 0.07 H -62.2 -50.7 16.0 0.07 0.0 BUI
HOH
 4.067
2.345
 OH
OH
 O9
O
2fyo 1 P18886 84.02 0.0 X-RAY
 2007-02-08 TYR A:115 A:120 33.0 0.143 H -62.6 -44.2 33.0 0.143 0.0 HOH
 2.644
 O
 O
2rcu 1 P18886 84.02 0.0 X-RAY
 2007-10-16 TYR A:115 A:120 16.0 0.07 H -74.5 -47.2 16.0 0.07 0.0 BUJ
HOH
 3.889
2.666
 OH
OH
 O14
O
TYR B:115 B:120 15.0 0.065 H -71.0 -50.2 NA NA NA
4ep9 1 P18886 84.02 0.0 X-RAY
 2013-04-17 TYR A:115 A:120 18.0 0.078 H -70.8 -50.2 18.0 0.078 0.0 0RD
PLM
HOH
 5.790
8.602
2.807
 OH
OH
OH
 O27
CG
O
4eph 1 P18886 84.02 0.0 X-RAY
 2013-04-17 TYR A:115 A:120 22.0 0.096 H -63.6 -54.1 22.0 0.096 0.0 0RK
BOG
HOH
 5.958
6.239
2.694
 OH
OH
O
 O25
C2
O
2h4t 1 P18886 84.27 0.0 X-RAY
 2006-07-25 TYR A:90 A:120 43.0 0.187 H -76.8 -33.0 43.0 0.187 0.0 D12
HOH
 4.337
2.672
 OH
O
 C3
O
TYR B:90 B:120 43.0 0.187 H -78.2 -31.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p23786-f1 1 P23786 100.0 0.0 TYR A:120 A:120 31.0 0.135 H -70.8 -46.3