Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 53676194 . C A CCDS575.1:NM_000098.2:c.848gCc>gAc_NP_000089.1:p.283A>D Homo sapiens carnitine palmitoyltransferase 2 (CPT2), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4eyw 1 P18886 84.02 0.0 X-RAY
 2013-04-24 VAL A:259 A:283 71.0 0.458 -47.4 136.8 71.0 0.458 0.0 HOH
 2.561
 O
 O
VAL B:259 B:283 84.0 0.542 -54.4 143.4 NA NA NA
2deb 1 P18886 84.02 0.0 X-RAY
 2007-02-10 VAL A:278 A:283 71.0 0.458 -53.0 135.9 71.0 0.458 0.0 HOH
 2.707
 O
 O
VAL B:278 B:283 89.0 0.574 -54.4 144.2 NA NA NA
2fw3 1 P18886 84.02 0.0 X-RAY
 2007-02-01 VAL A:278 A:283 79.0 0.51 -77.2 123.1 79.0 0.51 0.0 HOH
 5.991
 O
 O
2fyo 1 P18886 84.02 0.0 X-RAY
 2007-02-08 VAL A:278 A:283 71.0 0.458 -48.7 129.7 71.0 0.458 0.0 HOH
 3.000
 N
 O
2rcu 1 P18886 84.02 0.0 X-RAY
 2007-10-16 VAL A:278 A:283 70.0 0.452 -52.5 136.1 70.0 0.452 0.0 HOH
 3.702
 CG2
 O
VAL B:278 B:283 90.0 0.581 -47.9 140.3 NA NA NA
4ep9 1 P18886 84.02 0.0 X-RAY
 2013-04-17 VAL A:278 A:283 66.0 0.426 -45.7 130.9 66.0 0.426 0.0 HOH
 3.026
 N
 O
4eph 1 P18886 84.02 0.0 X-RAY
 2013-04-17 VAL A:278 A:283 69.0 0.445 -49.2 135.2 69.0 0.445 0.0 HOH
 2.507
 O
 O
2h4t 1 P18886 84.27 0.0 X-RAY
 2006-07-25 VAL A:253 A:283 75.0 0.484 -55.4 140.5 75.0 0.484 0.0 HOH
 2.909
 N
 O
VAL B:253 B:283 80.0 0.516 -55.4 138.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p23786-f1 1 P23786 100.0 0.0 ALA A:283 A:283 51.0 0.443 -60.6 142.2