Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 53676371 . T A CCDS575.1:NM_000098.2:c.1025aTg>aAg_NP_000089.1:p.342M>K Homo sapiens carnitine palmitoyltransferase 2 (CPT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4eyw 1 P18886 84.02 0.0 X-RAY
 2013-04-24 MET A:318 A:342 0.0 0.0 H -84.1 -29.8 0.0 0.0 0.0 HOH
 2.912
 O
 O
MET B:318 B:342 0.0 0.0 H -84.4 -29.8 NA NA NA
2deb 1 P18886 84.02 0.0 X-RAY
 2007-02-10 MSE A:337 A:342 0.0 0.0 H -80.0 -29.3 0.0 0.0 0.0 PLM
HOH
 9.697
2.842
 O
O
 CF
O
MSE B:337 B:342 0.0 0.0 H -85.2 -26.2 NA NA NA
2fw3 1 P18886 84.02 0.0 X-RAY
 2007-02-01 MET A:337 A:342 0.0 0.0 H -85.8 -23.9 0.0 0.0 0.0 HOH
 5.746
 N
 O
2fyo 1 P18886 84.02 0.0 X-RAY
 2007-02-08 MSE A:337 A:342 0.0 0.0 H -73.6 -29.9 0.0 0.0 0.0 HOH
 2.890
 O
 O
2rcu 1 P18886 84.02 0.0 X-RAY
 2007-10-16 MET A:337 A:342 0.0 0.0 H -87.3 -29.2 0.0 0.0 0.0 HOH
 2.976
 O
 O
MET B:337 B:342 0.0 0.0 H -81.7 -30.2 NA NA NA
4ep9 1 P18886 84.02 0.0 X-RAY
 2013-04-17 MET A:337 A:342 0.0 0.0 H -82.0 -25.8 0.0 0.0 0.0 HOH
 2.819
 O
 O
4eph 1 P18886 84.02 0.0 X-RAY
 2013-04-17 MET A:337 A:342 0.0 0.0 H -82.8 -25.3 0.0 0.0 0.0 HOH
 5.892
 N
 O
2h4t 1 P18886 84.27 0.0 X-RAY
 2006-07-25 MET A:312 A:342 0.0 0.0 H -82.2 -26.5 0.0 0.0 0.0 HOH
 3.100
 O
 O
MET B:312 B:342 0.0 0.0 H -80.9 -29.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p23786-f1 1 P23786 100.0 0.0 MET A:342 A:342 0.0 0.0 H -80.4 -24.4