Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 53676811 | . | T | A | CCDS575.1:NM_000098.2:c.1465Tgt>Agt_NP_000089.1:p.489C>S | Homo sapiens carnitine palmitoyltransferase 2 (CPT2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4eyw | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2013-04-24 | CYS | A:465 | A:489 | 20.0 | 0.148 | E | -139.2 | 140.1 | 20.0 | 0.148 | 0.0 |
L0R HOH |
3.583 5.046 |
CA N |
O12 O |
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| CYS | B:465 | B:489 | 19.0 | 0.141 | E | -134.2 | 136.9 | NA | NA | NA | |||||||||||||
| 2deb | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2007-02-10 | CYS | A:484 | A:489 | 16.0 | 0.119 | E | -134.8 | 136.9 | 16.0 | 0.119 | 0.0 |
HOH |
3.746 |
C |
O |
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| CYS | B:484 | B:489 | 19.0 | 0.141 | E | -136.1 | 136.2 | NA | NA | NA | |||||||||||||
| 2fw3 | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2007-02-01 | CYS | A:484 | A:489 | 19.0 | 0.141 | E | -139.9 | 145.8 | 19.0 | 0.141 | 0.0 |
BUI HOH |
5.465 3.585 |
N CA |
O8 O |
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| 2fyo | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2007-02-08 | CYS | A:484 | A:489 | 16.0 | 0.119 | E | -131.0 | 134.6 | 16.0 | 0.119 | 0.0 |
HOH |
3.627 |
CA |
O |
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| 2rcu | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2007-10-16 | CYS | A:484 | A:489 | 17.0 | 0.126 | E | -142.5 | 133.3 | 17.0 | 0.126 | 0.0 |
BUJ HOH |
5.461 3.671 |
N CA |
O13 O |
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| CYS | B:484 | B:489 | 14.0 | 0.104 | E | -140.0 | 134.6 | NA | NA | NA | |||||||||||||
| 4ep9 | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2013-04-17 | CYS | A:484 | A:489 | 16.0 | 0.119 | E | -135.4 | 128.6 | 16.0 | 0.119 | 0.0 |
0RD PLM HOH |
3.473 9.661 4.919 |
CA N N |
O20 CF O |
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| 4eph | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2013-04-17 | CYS | A:484 | A:489 | 19.0 | 0.141 | E | -146.3 | 124.1 | 19.0 | 0.141 | 0.0 |
0RK BOG HOH |
3.423 7.141 5.127 |
CA N N |
O24 O6 O |
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| 2h4t | 1 | P18886 | 84.27 | 0.0 |
X-RAY |
2006-07-25 | CYS | A:459 | A:489 | 17.0 | 0.126 | E | -144.8 | 150.9 | 17.0 | 0.126 | 0.0 |
D12 D12 HOH |
6.681 7.313 2.919 |
C N SG |
C7 C8 O |
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| CYS | B:459 | B:489 | 17.0 | 0.126 | E | -148.1 | 145.8 | NA | NA | NA | |||||||||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p23786-f1 | 1 | P23786 | 100.0 | 0.0 | CYS | A:489 | A:489 | 11.0 | 0.081 | E | -122.0 | 128.4 | |