Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 53676905 . C A CCDS575.1:NM_000098.2:c.1559cCc>cAc_NP_000089.1:p.520P>H Homo sapiens carnitine palmitoyltransferase 2 (CPT2), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4eyw 1 P18886 84.02 0.0 X-RAY
 2013-04-24 PRO A:496 A:520 46.0 0.317 T -59.6 -25.7 46.0 0.317 0.0 HOH
 2.584
 O
 O
PRO B:496 B:520 23.0 0.159 G -65.8 -25.8 NA NA NA
2deb 1 P18886 84.02 0.0 X-RAY
 2007-02-10 PRO A:515 A:520 34.0 0.234 G -60.2 -30.9 34.0 0.234 0.0 HOH
 3.527
 CG
 O
PRO B:515 B:520 33.0 0.228 G -57.9 -29.5 NA NA NA
2fw3 1 P18886 84.02 0.0 X-RAY
 2007-02-01 PRO A:515 A:520 72.0 0.497 T -59.7 -12.9 72.0 0.497 0.0 HOH
 3.542
 N
 O
2fyo 1 P18886 84.02 0.0 X-RAY
 2007-02-08 PRO A:515 A:520 43.0 0.297 G -69.0 -18.9 43.0 0.297 0.0 HOH
 3.301
 O
 O
2rcu 1 P18886 84.02 0.0 X-RAY
 2007-10-16 PRO A:515 A:520 32.0 0.221 G -63.1 -22.1 32.0 0.221 0.0 HOH
 5.508
 CG
 O
PRO B:515 B:520 39.0 0.269 G -61.1 -31.7 NA NA NA
4ep9 1 P18886 84.02 0.0 X-RAY
 2013-04-17 PRO A:515 A:520 43.0 0.297 T -60.0 -20.4 43.0 0.297 0.0 HOH
 3.202
 CD
 O
4eph 1 P18886 84.02 0.0 X-RAY
 2013-04-17 PRO A:515 A:520 53.0 0.366 S -55.6 -25.2 53.0 0.366 0.0 HOH
 6.596
 CG
 O
2h4t 1 P18886 84.27 0.0 X-RAY
 2006-07-25 PRO A:490 A:520 61.0 0.421 S -61.1 167.2 61.0 0.421 0.0 HOH
 2.700
 O
 O
PRO B:490 B:520 27.0 0.186 G -64.6 -37.9 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p23786-f1 1 P23786 100.0 0.0 PRO A:520 A:520 7.0 0.048 G -60.7 -31.9