Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 53679088 . G A CCDS575.1:NM_000098.2:c.1798Ggg>Agg_NP_000089.1:p.600G>R Homo sapiens carnitine palmitoyltransferase 2 (CPT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4eyw 1 P18886 84.02 0.0 X-RAY
 2013-04-24 GLY A:576 A:600 17.0 0.227 E -127.8 177.6 17.0 0.227 0.0 P6G
HOH
 3.006
4.562
 N
O
 O10
O
GLY B:576 B:600 17.0 0.227 E -135.5 178.2 NA NA NA
2deb 1 P18886 84.02 0.0 X-RAY
 2007-02-10 GLY A:595 A:600 14.0 0.187 E -132.9 175.6 14.0 0.187 0.0 PLM
HOH
 3.012
4.608
 N
O
 C8
O
GLY B:595 B:600 13.0 0.173 E -132.4 178.7 NA NA NA
2fw3 1 P18886 84.02 0.0 X-RAY
 2007-02-01 GLY A:595 A:600 15.0 0.2 E -150.5 179.6 15.0 0.2 0.0 BUI
 3.843
 N
 C23
2fyo 1 P18886 84.02 0.0 X-RAY
 2007-02-08 GLY A:595 A:600 12.0 0.16 E -136.3 176.6 12.0 0.16 0.0 HOH
 3.249
 N
 O
2rcu 1 P18886 84.02 0.0 X-RAY
 2007-10-16 GLY A:595 A:600 15.0 0.2 E -154.6 178.8 15.0 0.2 0.0 BUJ
HOH
 3.509
4.541
 N
O
 C24
O
GLY B:595 B:600 16.0 0.213 E -159.9 177.4 NA NA NA
4ep9 1 P18886 84.02 0.0 X-RAY
 2013-04-17 GLY A:595 A:600 15.0 0.2 E -140.4 171.5 15.0 0.2 0.0 PLM
HOH
 3.158
4.441
 N
O
 C8
O
4eph 1 P18886 84.02 0.0 X-RAY
 2013-04-17 GLY A:595 A:600 16.0 0.213 E -130.0 -178.2 16.0 0.213 0.0 BOG
HOH
 3.973
4.544
 CA
O
 C6'
O
2h4t 1 P18886 84.27 0.0 X-RAY
 2006-07-25 GLY A:570 A:600 14.0 0.187 E -147.7 168.0 14.0 0.187 0.0 D12
D12
D12
HOH
 9.583
8.537
3.854
4.544
 CA
C
N
O
 C12
C11
C1
O
GLY B:570 B:600 7.0 0.093 E -150.8 172.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p23786-f1 1 P23786 100.0 0.0 GLY A:600 A:600 20.0 0.267 E -137.8 159.7