Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 53679089 | . | G | A | CCDS575.1:NM_000098.2:c.1799gGg>gAg_NP_000089.1:p.600G>E | Homo sapiens carnitine palmitoyltransferase 2 (CPT2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
4eyw | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2013-04-24 | GLY | A:576 | A:600 | 17.0 | 0.227 | E | -127.8 | 177.6 | 17.0 | 0.227 | 0.0 |
P6G HOH |
3.006 4.562 |
N O |
O10 O |
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GLY | B:576 | B:600 | 17.0 | 0.227 | E | -135.5 | 178.2 | NA | NA | NA | |||||||||||||
2deb | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2007-02-10 | GLY | A:595 | A:600 | 14.0 | 0.187 | E | -132.9 | 175.6 | 14.0 | 0.187 | 0.0 |
PLM HOH |
3.012 4.608 |
N O |
C8 O |
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GLY | B:595 | B:600 | 13.0 | 0.173 | E | -132.4 | 178.7 | NA | NA | NA | |||||||||||||
2fw3 | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2007-02-01 | GLY | A:595 | A:600 | 15.0 | 0.2 | E | -150.5 | 179.6 | 15.0 | 0.2 | 0.0 |
BUI |
3.843 |
N |
C23 |
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2fyo | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2007-02-08 | GLY | A:595 | A:600 | 12.0 | 0.16 | E | -136.3 | 176.6 | 12.0 | 0.16 | 0.0 |
HOH |
3.249 |
N |
O |
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2rcu | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2007-10-16 | GLY | A:595 | A:600 | 15.0 | 0.2 | E | -154.6 | 178.8 | 15.0 | 0.2 | 0.0 |
BUJ HOH |
3.509 4.541 |
N O |
C24 O |
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GLY | B:595 | B:600 | 16.0 | 0.213 | E | -159.9 | 177.4 | NA | NA | NA | |||||||||||||
4ep9 | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2013-04-17 | GLY | A:595 | A:600 | 15.0 | 0.2 | E | -140.4 | 171.5 | 15.0 | 0.2 | 0.0 |
PLM HOH |
3.158 4.441 |
N O |
C8 O |
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4eph | 1 | P18886 | 84.02 | 0.0 |
X-RAY |
2013-04-17 | GLY | A:595 | A:600 | 16.0 | 0.213 | E | -130.0 | -178.2 | 16.0 | 0.213 | 0.0 |
BOG HOH |
3.973 4.544 |
CA O |
C6' O |
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2h4t | 1 | P18886 | 84.27 | 0.0 |
X-RAY |
2006-07-25 | GLY | A:570 | A:600 | 14.0 | 0.187 | E | -147.7 | 168.0 | 14.0 | 0.187 | 0.0 |
D12 D12 D12 HOH |
9.583 8.537 3.854 4.544 |
CA C N O |
C12 C11 C1 O |
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GLY | B:570 | B:600 | 7.0 | 0.093 | E | -150.8 | 172.5 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p23786-f1 | 1 | P23786 | 100.0 | 0.0 | GLY | A:600 | A:600 | 20.0 | 0.267 | E | -137.8 | 159.7 |