Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 53679149 . G A CCDS575.1:NM_000098.2:c.1859tGg>tAg_NP_000089.1:p.620W>* Homo sapiens carnitine palmitoyltransferase 2 (CPT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4eyw 1 P18886 84.02 0.0 X-RAY
 2013-04-24 TRP A:596 A:620 79.0 0.31 -160.5 169.1 79.0 0.31 0.0 P6G
HOH
 3.774
2.887
 CH2
NE1
 C3
O
TRP B:596 B:620 85.0 0.333 -155.6 168.2 NA NA NA
2deb 1 P18886 84.02 0.0 X-RAY
 2007-02-10 TRP A:615 A:620 82.0 0.322 -159.3 168.3 82.0 0.322 0.0 PLM
HOH
 3.922
3.139
 CH2
NE1
 C1
O
TRP B:615 B:620 82.0 0.322 -163.4 167.5 NA NA NA
2fw3 1 P18886 84.02 0.0 X-RAY
 2007-02-01 TRP A:615 A:620 82.0 0.322 -158.1 163.2 82.0 0.322 0.0 BUI
HOH
 4.545
7.769
 CZ3
O
 C17
O
2fyo 1 P18886 84.02 0.0 X-RAY
 2007-02-08 TRP A:615 A:620 85.0 0.333 -152.6 166.9 85.0 0.333 0.0 HOH
 3.214
 CD1
 O
2rcu 1 P18886 84.02 0.0 X-RAY
 2007-10-16 TRP A:615 A:620 69.0 0.271 -157.4 167.1 69.0 0.271 0.0 BUJ
HOH
 4.598
4.108
 CZ3
CB
 C27
O
TRP B:615 B:620 66.0 0.259 -157.6 169.1 NA NA NA
4ep9 1 P18886 84.02 0.0 X-RAY
 2013-04-17 TRP A:615 A:620 89.0 0.349 -158.6 166.9 89.0 0.349 0.0 PLM
HOH
 4.009
3.110
 CH2
CD1
 C1
O
4eph 1 P18886 84.02 0.0 X-RAY
 2013-04-17 TRP A:615 A:620 83.0 0.325 -149.7 165.1 83.0 0.325 0.0 BOG
HOH
 9.717
3.462
 CH2
CZ2
 C8'
O
2h4t 1 P18886 84.27 0.0 X-RAY
 2006-07-25 TRP A:590 A:620 83.0 0.325 -155.8 170.8 83.0 0.325 0.0 D12
HOH
 4.198
3.525
 CZ3
NE1
 C7
O
TRP B:590 B:620 87.0 0.341 -156.5 173.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p23786-f1 1 P23786 100.0 0.0 TRP A:620 A:620 59.0 0.231 -152.1 162.2