Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 53699248 . G A CCDS577.1:NM_002370.3:c.224gCa>gTa_NP_002361.1:p.75A>V Homo sapiens mago homolog, exon junction complex core component (MAGOH), mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2hyi 2 P61326 100.0 3e-106 X-RAY
 2006-08-15 ALA C:75 A:75 65.0 0.565 T -36.6 -47.8 65.0 0.565 0.0
ALA G:75 G:75 72.0 0.626 T -45.1 -44.3 NA NA NA
2j0q 2 P61326 100.0 3e-106 X-RAY
 2006-08-30 ALA C:75 C:75 71.0 0.617 T -40.8 -42.9 71.0 0.617 0.0
ALA F:75 F:75 71.0 0.617 T -40.7 -43.8 NA NA NA
2j0s 2 P61326 100.0 3e-106 X-RAY
 2006-09-06 ALA B:75 C:75 75.0 0.652 T -58.8 -29.3 75.0 0.652 0.0 HOH
 3.334
 N
 O
2xb2 2 P61326 100.0 3e-106 X-RAY
 2010-05-12 ALA B:75 C:75 66.0 0.574 S -66.1 -64.9 NA NA NA
ALA L:75 Y:75 67.0 0.583 S -65.2 -65.0 67.0 0.583 0.0
3ex7 1 P61326 100.0 3e-106 X-RAY
 2008-12-09 ALA A:75 A:75 76.0 0.661 T -50.8 -41.2 76.0 0.661 0.0 HOH
 3.493
 N
 O
ALA E:75 E:75 70.0 0.609 G -61.4 -39.2 NA NA NA
7a5p 34 P61326 100.0 3e-106 EM
 2020-10-14 ALA RA:75 v:77 104.0 0.904 T -50.5 -40.9 104.0 0.904 0.0
5xjc 38 Q96A72 98.63 4e-105 EM
 2017-07-05 ALA VA:77 v:77 65.0 0.565 T -36.6 -47.8 65.0 0.565 0.0
5yzg 30 Q96A72 98.63 4e-105 EM
 2018-08-08 ALA GA:77 v:77 65.0 0.565 T -36.6 -47.9 65.0 0.565 0.0
6icz 1 Q96A72 98.63 4e-105 EM
 2019-03-13 ALA A:77 v:75 104.0 0.904 T -36.6 -47.8 104.0 0.904 0.0
1p27 1 P61326 100.0 9e-105 X-RAY
 2003-08-19 ALA A:74 A:75 79.0 0.687 T -62.4 -52.1 79.0 0.687 0.0 HOH
 3.256
 N
 O
ALA C:74 C:75 78.0 0.678 T -51.5 -45.8 78.0 0.678 0.0 HOH
 3.387
 N
 O
6qdv 6 Q96A72 100.0 1e-104 EM
 2019-02-20 ALA F:73 9:77 64.0 0.557 T -36.6 -47.8 64.0 0.557 0.0
1oo0 1 P49028 91.61 7e-96 X-RAY
 2003-05-27 LEU A:76 A:76 144.0 0.847 T -50.6 -49.1 144.0 0.847 0.0 HOH
 5.058
 CB
 O
1rk8 2 P49028 91.61 7e-96 X-RAY
 2004-04-13 LEU B:76 B:76 140.0 0.824 T -52.9 -50.3 140.0 0.824 0.0 HOH
 5.051
 N
 O
2x1g 2 P49028 91.61 7e-96 X-RAY
 2010-02-16 LEU B:76 B:76 89.0 NA S -48.0 -52.5 40.0 NA NA E:Q9VEC5:NA
LEU D:76 D:76 88.0 NA S -47.9 -52.5 NA NA NA
1hl6 2 P49028 91.61 9e-96 X-RAY
 2003-05-08 LEU B:76 B:76 154.0 0.906 T -56.1 -41.0 126.0 0.741 0.165 A:Q9V535:0.165
 HOH
 3.762
 CD2
 O
LEU D:76 D:76 151.0 0.888 T -49.5 -40.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p61326-f1 1 P61326 100.0 1e-106 ALA A:75 A:75 81.0 0.704 G -60.2 -26.1
af-q96a72-f1 1 Q96A72 98.63 2e-105 ALA A:77 A:77 79.0 0.687 G -58.9 -26.0