Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 64059362 . A C CCDS625.1:NM_002633.2:c.203aAg>aCg_NP_002624.2:p.68K>T Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5epc 1 P36871 100.0 0.0 X-RAY
 2016-04-27 LYS A:91 A:68 90.0 0.45 H -66.9 -34.9 90.0 0.45 0.0 GOL
HOH
 2.988
3.310
 N
NZ
 O2
O
LYS B:91 B:68 104.0 0.52 H -62.8 -37.6 NA NA NA
6uiq 1 P36871 100.0 0.0 X-RAY
 2020-08-12 LYS A:91 B:68 95.0 0.475 H -69.8 -39.1 95.0 0.475 0.0 HOH
 3.174
 N
 O
LYS B:91 A:68 101.0 0.505 H -63.6 -42.2 NA NA NA
5vin 1 P36871 99.82 0.0 X-RAY
 2018-06-27 LYS A:91 A:68 80.0 0.4 H -66.2 -35.6 80.0 0.4 0.0 SO4
HOH
 2.949
4.764
 N
CE
 O2
O
LYS B:91 B:68 76.0 0.38 H -62.4 -39.3 NA NA NA
6uo6 1 P36871 99.82 0.0 X-RAY
 2020-03-04 LYS A:91 A:68 90.0 0.45 H -69.7 -35.4 90.0 0.45 0.0 HOH
 3.288
 N
 O
LYS B:91 B:68 95.0 0.475 H -61.3 -40.2 NA NA NA
5vg7 1 P36871 99.82 0.0 X-RAY
 2018-06-20 LYS A:70 A:68 93.0 0.465 H -69.5 -37.8 93.0 0.465 0.0 SO4
HOH
 2.986
3.201
 N
NZ
 O2
O
5vg7 2 P36871 99.82 0.0 X-RAY
 2018-06-20 LYS B:70 B:68 99.0 0.495 H -62.4 -39.9 NA NA NA
5f9c 1 P36871 99.82 0.0 X-RAY
 2016-04-27 LYS A:68 A:68 90.0 0.45 H -66.6 -37.0 90.0 0.45 0.0
LYS B:68 B:68 88.0 0.44 H -62.5 -41.4 NA NA NA
5hsh 1 P36871 99.82 0.0 X-RAY
 2016-04-27 LYS A:68 A:68 86.0 0.43 H -57.5 -34.9 86.0 0.43 0.0 HOH
 6.407
 O
 O
LYS B:68 B:68 84.0 0.42 H -53.2 -28.7 NA NA NA
5tr2 1 P36871 99.82 0.0 X-RAY
 2017-02-08 LYS A:91 A:68 103.0 0.515 H -55.6 -42.5 103.0 0.515 0.0 HOH
 7.073
 CE
 O
LYS B:91 B:68 88.0 0.44 H -62.2 -47.2 NA NA NA
5jn5 1 P36871 99.82 0.0 X-RAY
 2017-02-08 LYS A:91 A:68 93.0 0.465 H -66.4 -37.6 93.0 0.465 0.0 SO4
HOH
 2.796
3.266
 N
CE
 O2
O
LYS B:91 B:68 87.0 0.435 H -65.8 -37.1 NA NA NA
5vec 1 P36871 99.82 0.0 X-RAY
 2018-06-27 LYS A:91 A:68 90.0 0.45 H -65.7 -39.0 90.0 0.45 0.0 GOL
HOH
 3.084
3.281
 N
CE
 C1
O
LYS B:91 B:68 102.0 0.51 H -75.2 -21.4 NA NA NA
5vbi 1 P36871 99.82 0.0 X-RAY
 2018-06-20 LYS A:91 A:68 95.0 0.475 H -66.7 -36.2 95.0 0.475 0.0 HOH
 2.975
 N
 O
LYS B:91 B:68 91.0 0.455 H -62.1 -38.7 NA NA NA
1c47 1 P00949 96.97 0.0 X-RAY
 1999-08-13 LYS A:67 A:67 80.0 0.4 H -66.8 -44.4 80.0 0.4 0.0 HOH
 6.238
 NZ
 O
LYS B:67 B:67 86.0 0.43 H -55.1 -43.3 86.0 0.43 0.0
1c4g 1 P00949 96.97 0.0 X-RAY
 1999-08-27 LYS A:67 A:67 73.0 0.365 H -56.3 -47.4 73.0 0.365 0.0 HOH
 2.634
 O
 O
LYS B:67 B:67 81.0 0.405 H -60.4 -45.1 81.0 0.405 0.0 HOH
 7.144
 NZ
 O
1jdy 1 P00949 96.97 0.0 X-RAY
 1997-03-12 LYS A:67 A:67 82.0 0.41 H -65.5 -38.1 82.0 0.41 0.0 HOH
 2.771
 NZ
 O
LYS B:67 B:67 78.0 0.39 H -53.1 -52.8 NA NA NA
1lxt 1 P00949 96.97 0.0 X-RAY
 1997-02-12 LYS A:67 A:67 93.0 0.465 H -53.2 -68.6 93.0 0.465 0.0 HOH
 3.169
 CE
 O
LYS B:67 B:67 81.0 0.405 H -53.3 -47.9 NA NA NA
1vkl 1 P00949 96.97 0.0 X-RAY
 1997-01-11 LYS A:67 A:67 83.0 0.415 H -63.0 -37.8 83.0 0.415 0.0 HOH
 2.769
 NZ
 O
LYS B:67 B:67 81.0 0.405 H -58.3 -41.7 NA NA NA
3pmg 1 P00949 96.97 0.0 X-RAY
 1995-12-07 LYS A:67 A:67 86.0 0.43 H -60.0 -47.7 NA NA NA
LYS B:67 B:67 84.0 0.42 H -51.5 -45.6 84.0 0.42 0.0 HOH
 1.814
 HZ2
 O
6sno 1 P36871 93.05 0.0 X-RAY
 2020-04-08 LYS A:89 A:86 95.0 0.475 H -67.2 -44.4 95.0 0.475 0.0 HOH
 3.472
 CG
 O
6snp 1 P36871 93.05 0.0 X-RAY
 2020-04-08 LYS A:89 A:86 81.0 0.405 H -64.3 -49.3 81.0 0.405 0.0 HOH
 3.555
 N
 O
6snq 1 P36871 93.05 0.0 X-RAY
 2020-04-08 LYS A:89 A:86 95.0 0.475 H -67.4 -43.5 95.0 0.475 0.0 HOH
 3.490
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p36871-f1 1 P36871 100.0 0.0 LYS A:68 A:68 107.0 0.535 H -63.4 -39.0