Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 64089381 . T A CCDS53323.1:NM_001172818.1:c.250Ttt>Att_NP_001166289.1:p.84F>I Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 2, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6sno 1 P36871 100.0 0.0 X-RAY
 2020-04-08 PHE A:87 A:84 31.0 0.148 T 74.3 -4.6 31.0 0.148 0.0 HOH
 5.244
 N
 O
6snp 1 P36871 100.0 0.0 X-RAY
 2020-04-08 PHE A:87 A:84 41.0 0.195 T 70.1 0.6 41.0 0.195 0.0 HOH
 4.080
 N
 O
6snq 1 P36871 100.0 0.0 X-RAY
 2020-04-08 PHE A:87 A:84 32.0 0.152 T 71.5 1.4 32.0 0.152 0.0 HOH
 4.060
 N
 O
5epc 1 P36871 93.05 0.0 X-RAY
 2016-04-27 TYR A:89 A:66 18.0 0.078 T 85.3 -6.6 18.0 0.078 0.0 GOL
HOH
 2.967
2.793
 N
OH
 C1
O
TYR B:89 B:66 17.0 0.074 T 84.0 -10.4 NA NA NA
6uiq 1 P36871 93.05 0.0 X-RAY
 2020-08-12 TYR A:89 B:66 16.0 0.07 T 89.8 -7.3 16.0 0.07 0.0 HOH
 2.496
 OH
 O
TYR B:89 A:66 15.0 0.065 T 81.6 -10.6 NA NA NA
5vin 1 P36871 92.87 0.0 X-RAY
 2018-06-27 TYR A:89 A:66 20.0 0.087 T 85.1 -5.0 20.0 0.087 0.0 SO4
HOH
 3.090
5.646
 N
OH
 O4
O
TYR B:89 B:66 27.0 0.117 T 82.3 -5.5 NA NA NA
6uo6 1 P36871 92.87 0.0 X-RAY
 2020-03-04 TYR A:89 A:66 15.0 0.065 T 86.8 -8.3 15.0 0.065 0.0 HOH
 2.492
 OH
 O
TYR B:89 B:66 17.0 0.074 T 86.8 -11.5 NA NA NA
5vg7 1 P36871 92.87 0.0 X-RAY
 2018-06-20 TYR A:68 A:66 18.0 0.078 T 87.8 -7.5 18.0 0.078 0.0 SO4
HOH
 2.919
2.635
 N
OH
 O4
O
5vg7 2 P36871 92.87 0.0 X-RAY
 2018-06-20 TYR B:68 B:66 16.0 0.07 T 88.3 -11.6 NA NA NA
5vec 1 P36871 92.87 0.0 X-RAY
 2018-06-27 TYR A:89 A:66 14.0 0.061 T 84.8 -7.4 14.0 0.061 0.0 GOL
HOH
 3.132
3.183
 N
CD1
 O2
O
TYR B:89 B:66 20.0 0.087 T 76.8 -13.7 NA NA NA
5tr2 1 P36871 92.87 0.0 X-RAY
 2017-02-08 TYR A:89 A:66 34.0 0.148 T 89.6 -2.1 34.0 0.148 0.0 HOH
 3.838
 OH
 O
TYR B:89 B:66 22.0 0.096 T 72.6 -1.4 NA NA NA
5f9c 1 P36871 92.87 0.0 X-RAY
 2016-04-27 TYR A:66 A:66 18.0 0.078 T 79.6 -10.6 18.0 0.078 0.0
TYR B:66 B:66 53.0 0.23 T 81.4 -11.4 NA NA NA
5hsh 1 P36871 92.87 0.0 X-RAY
 2016-04-27 TYR A:66 A:66 121.0 NA 360.0 -44.3 121.0 NA NA HOH
 6.305
 CB
 O
TYR B:66 B:66 118.0 NA 360.0 -45.3 NA NA NA
5jn5 1 P36871 92.87 0.0 X-RAY
 2017-02-08 TYR A:89 A:66 21.0 0.091 T 88.1 -10.5 21.0 0.091 0.0 SO4
HOH
 2.787
2.663
 N
OH
 O4
O
TYR B:89 B:66 16.0 0.07 T 84.1 -4.2 NA NA NA
5vbi 1 P36871 92.87 0.0 X-RAY
 2018-06-20 TYR A:89 A:66 16.0 0.07 T 86.3 -7.8 16.0 0.07 0.0 HOH
 2.639
 OH
 O
TYR B:89 B:66 16.0 0.07 T 85.9 -10.2 NA NA NA
1c47 1 P00949 90.91 0.0 X-RAY
 1999-08-13 TYR A:65 A:65 20.0 0.087 T 75.5 -21.8 20.0 0.087 0.0 HOH
 8.512
 N
 O
TYR B:65 B:65 18.0 0.078 T 70.6 -15.2 18.0 0.078 0.0
1c4g 1 P00949 90.91 0.0 X-RAY
 1999-08-27 TYR A:65 A:65 26.0 0.113 T 75.1 -13.7 26.0 0.113 0.0 HOH
 5.491
 N
 O
TYR B:65 B:65 21.0 0.091 T 61.7 -15.5 21.0 0.091 0.0 HOH
 7.071
 C
 O
1jdy 1 P00949 90.91 0.0 X-RAY
 1997-03-12 TYR A:65 A:65 19.0 0.083 T 74.0 -5.4 19.0 0.083 0.0 HOH
 2.721
 N
 O
TYR B:65 B:65 15.0 0.065 T 78.7 -5.8 NA NA NA
1lxt 1 P00949 90.91 0.0 X-RAY
 1997-02-12 TYR A:65 A:65 20.0 0.087 T 68.5 3.2 20.0 0.087 0.0 HOH
 3.332
 N
 O
TYR B:65 B:65 17.0 0.074 T 86.2 -9.7 NA NA NA
1vkl 1 P00949 90.91 0.0 X-RAY
 1997-01-11 TYR A:65 A:65 20.0 0.087 T 86.7 -13.2 20.0 0.087 0.0 HOH
 3.079
 N
 O
TYR B:65 B:65 18.0 0.078 T 90.3 -8.4 NA NA NA
3pmg 1 P00949 90.91 0.0 X-RAY
 1995-12-07 TYR A:65 A:65 30.0 0.13 T 74.4 -4.6 NA NA NA
TYR B:65 B:65 16.0 0.07 T 74.0 -9.4 16.0 0.07 0.0 HOH
 1.837
 H
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p36871-f1 1 P36871 93.05 0.0 TYR A:66 A:66 15.0 0.065 T 72.0 -13.0