Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64095192 | . | A | C | CCDS625.1:NM_002633.2:c.343Aca>Cca_NP_002624.2:p.115T>P | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | THR | A:138 | A:115 | 3.0 | 0.021 | -152.6 | 150.5 | 3.0 | 0.021 | 0.0 |
MG SO4 HOH |
5.983 7.682 2.771 |
OG1 OG1 O |
MG O1 O |
|||
| THR | B:138 | B:115 | 4.0 | 0.029 | -155.1 | 148.1 | NA | NA | NA | ||||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | THR | A:138 | B:115 | 5.0 | 0.036 | -156.2 | 143.3 | 5.0 | 0.036 | 0.0 |
MG HOH |
6.205 2.766 |
OG1 O |
MG O |
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| THR | B:138 | A:115 | 3.0 | 0.021 | -161.8 | 146.1 | NA | NA | NA | ||||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | THR | A:138 | A:115 | 8.0 | 0.057 | -152.5 | 151.3 | 8.0 | 0.057 | 0.0 |
CO HOH |
6.007 8.352 |
OG1 CG2 |
CO O |
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| THR | B:138 | B:115 | 0.0 | 0.0 | -157.6 | 148.5 | NA | NA | NA | ||||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | THR | A:138 | A:115 | 1.0 | 0.007 | -150.4 | 146.4 | 1.0 | 0.007 | 0.0 |
MG SO4 HOH |
5.848 8.360 2.799 |
OG1 O O |
MG O3 O |
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| THR | B:138 | B:115 | 6.0 | 0.043 | -158.3 | 144.3 | NA | NA | NA | ||||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | THR | A:117 | A:115 | 2.0 | 0.014 | -156.1 | 149.1 | 2.0 | 0.014 | 0.0 |
MG HOH |
5.936 2.621 |
OG1 O |
MG O |
|||
| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | THR | B:117 | B:115 | 5.0 | 0.036 | -157.7 | 148.7 | NA | NA | NA | |||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | THR | A:115 | A:115 | 4.0 | 0.029 | -151.0 | 166.0 | 4.0 | 0.029 | 0.0 |
MG HOH |
6.278 8.556 |
OG1 CG2 |
MG O |
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| THR | B:115 | B:115 | 23.0 | 0.164 | -155.1 | 360.0 | NA | NA | NA | ||||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | THR | A:115 | A:115 | 37.0 | 0.264 | E | -130.7 | 144.4 | 37.0 | 0.264 | 0.0 |
HOH |
6.299 |
C |
O |
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| THR | B:115 | B:115 | 35.0 | 0.25 | E | -131.5 | 138.4 | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | THR | A:138 | A:115 | 6.0 | 0.043 | -154.4 | 149.6 | 6.0 | 0.043 | 0.0 |
CA HOH |
5.971 5.167 |
OG1 CG2 |
CA O |
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| THR | B:138 | B:115 | 2.0 | 0.014 | -139.7 | 158.9 | NA | NA | NA | ||||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | THR | A:138 | A:115 | 2.0 | 0.014 | -153.7 | 149.0 | 2.0 | 0.014 | 0.0 |
CA HOH |
6.123 2.742 |
OG1 N |
CA O |
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| THR | B:138 | B:115 | 4.0 | 0.029 | -153.9 | 144.3 | NA | NA | NA | ||||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | THR | A:138 | A:115 | 2.0 | 0.014 | -151.3 | 151.2 | 2.0 | 0.014 | 0.0 |
SO4 MG HOH |
8.490 6.057 2.643 |
O OG1 O |
O2 MG O |
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| THR | B:138 | B:115 | 4.0 | 0.029 | -159.5 | 142.5 | NA | NA | NA | ||||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | THR | A:138 | A:115 | 4.0 | 0.029 | -152.9 | 148.7 | 4.0 | 0.029 | 0.0 |
MG HOH |
5.937 2.684 |
OG1 O |
MG O |
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| THR | B:138 | B:115 | 4.0 | 0.029 | -157.2 | 146.4 | NA | NA | NA | ||||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | THR | A:114 | A:114 | 0.0 | 0.0 | -153.3 | 140.7 | 0.0 | 0.0 | 0.0 |
G16 CD HOH |
6.814 5.988 4.265 |
OG1 OG1 CB |
O1P CD O |
|||
| THR | B:114 | B:114 | 3.0 | 0.021 | -166.0 | 147.5 | 3.0 | 0.021 | 0.0 |
CD HOH |
6.124 2.583 |
OG1 O |
CD O |
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| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | THR | A:114 | A:114 | 1.0 | 0.007 | -166.3 | 142.3 | 1.0 | 0.007 | 0.0 |
CO VG1 HOH |
6.187 6.559 4.162 |
OG1 CG2 CG2 |
CO OV3 O |
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| THR | B:114 | B:114 | 9.0 | 0.064 | -130.7 | 148.8 | 9.0 | 0.064 | 0.0 |
HOH |
2.692 |
OG1 |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | THR | A:114 | A:114 | 3.0 | 0.021 | -153.8 | 148.0 | 3.0 | 0.021 | 0.0 |
CD HOH |
6.014 3.306 |
OG1 O |
CD O |
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| THR | B:114 | B:114 | 5.0 | 0.036 | -147.3 | 150.4 | NA | NA | NA | ||||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | THR | A:114 | A:114 | 0.0 | 0.0 | -143.9 | 133.4 | 0.0 | 0.0 | 0.0 |
CD SO4 HOH |
6.132 7.401 4.013 |
OG1 OG1 CB |
CD O2 O |
|||
| THR | B:114 | B:114 | 2.0 | 0.014 | -146.9 | 152.0 | NA | NA | NA | ||||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | THR | A:114 | A:114 | 0.0 | 0.0 | -153.8 | 151.8 | 0.0 | 0.0 | 0.0 |
NI HOH |
5.965 4.031 |
OG1 CB |
NI O |
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| THR | B:114 | B:114 | 4.0 | 0.029 | -151.7 | 161.2 | NA | NA | NA | ||||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | THR | A:114 | A:114 | 0.0 | 0.0 | -164.0 | 155.3 | NA | NA | NA | |||||||
| THR | B:114 | B:114 | 3.0 | 0.021 | -144.6 | 141.0 | 3.0 | 0.021 | 0.0 |
MG HOH |
5.792 1.976 |
OG1 O |
MG H1 |
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| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | THR | A:136 | A:133 | 4.0 | 0.029 | -149.9 | 151.8 | 4.0 | 0.029 | 0.0 |
ZN G1P HOH |
5.726 9.631 8.120 |
OG1 OG1 C |
ZN O6 O |
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| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | THR | A:136 | A:133 | 0.0 | 0.0 | -152.4 | 150.1 | 0.0 | 0.0 | 0.0 |
MG HOH |
6.180 7.561 |
OG1 N |
MG O |
|||
| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | THR | A:136 | A:133 | 3.0 | 0.021 | -153.2 | 155.1 | 3.0 | 0.021 | 0.0 |
ZN HOH |
5.928 3.143 |
OG1 N |
ZN O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | THR | A:115 | A:115 | 2.0 | 0.014 | -155.3 | 148.3 | ||