Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64095210 | . | G | A | CCDS625.1:NM_002633.2:c.361Ggg>Agg_NP_002624.2:p.121G>R | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | GLY | A:144 | A:121 | 11.0 | 0.147 | -129.2 | 173.9 | 11.0 | 0.147 | 0.0 |
GOL HOH |
9.319 2.997 |
C N |
C1 O |
|||
| GLY | B:144 | B:121 | 10.0 | 0.133 | -137.1 | 172.5 | NA | NA | NA | ||||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | GLY | A:144 | B:121 | 11.0 | 0.147 | -131.4 | -175.6 | 11.0 | 0.147 | 0.0 |
HOH |
3.007 |
N |
O |
|||
| GLY | B:144 | A:121 | 12.0 | 0.16 | -122.7 | -178.1 | NA | NA | NA | ||||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | GLY | A:144 | A:121 | 11.0 | 0.147 | -127.2 | 174.5 | 11.0 | 0.147 | 0.0 |
SO4 SO4 SO4 HOH |
9.460 8.563 3.713 7.597 |
C N O N |
O4 O4 O3 O |
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| GLY | B:144 | B:121 | 10.0 | 0.133 | -138.2 | 172.9 | NA | NA | NA | ||||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | GLY | A:144 | A:121 | 9.0 | 0.12 | -126.9 | 166.9 | 9.0 | 0.12 | 0.0 |
HOH |
2.975 |
N |
O |
|||
| GLY | B:144 | B:121 | 11.0 | 0.147 | -129.4 | -172.1 | NA | NA | NA | ||||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | GLY | A:123 | A:121 | 10.0 | 0.133 | -126.9 | 169.1 | 10.0 | 0.133 | 0.0 |
SO4 HOH |
9.357 2.854 |
C O |
O4 O |
|||
| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | GLY | B:123 | B:121 | 10.0 | 0.133 | -130.0 | 174.8 | NA | NA | NA | |||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ARG | A:121 | A:121 | 24.0 | 0.107 | -111.5 | 152.4 | 24.0 | 0.107 | 0.0 |
MG |
9.252 |
NH2 |
MG |
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| ARG | B:121 | B:121 | 44.0 | NA | -114.4 | 360.0 | NA | NA | NA | ||||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | GLY | A:121 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| GLY | B:121 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | GLY | A:144 | A:121 | 7.0 | 0.093 | -109.4 | 158.9 | 7.0 | 0.093 | 0.0 |
SO4 HOH |
7.975 8.093 |
N O |
O3 O |
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| GLY | B:144 | B:121 | 13.0 | 0.173 | -107.7 | -171.2 | NA | NA | NA | ||||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | GLY | A:144 | A:121 | 10.0 | 0.133 | -124.8 | 171.3 | 10.0 | 0.133 | 0.0 |
SO4 SO4 HOH |
9.292 8.936 2.999 |
C N O |
O4 O3 O |
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| GLY | B:144 | B:121 | 11.0 | 0.147 | -129.7 | 168.3 | NA | NA | NA | ||||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | GLY | A:144 | A:121 | 9.0 | 0.12 | -122.4 | 162.3 | 9.0 | 0.12 | 0.0 |
GOL HOH |
9.450 2.775 |
C N |
O2 O |
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| GLY | B:144 | B:121 | 8.0 | 0.107 | -134.8 | 165.2 | NA | NA | NA | ||||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | GLY | A:144 | A:121 | 10.0 | 0.133 | -129.0 | 170.3 | 10.0 | 0.133 | 0.0 |
HOH |
3.003 |
N |
O |
|||
| GLY | B:144 | B:121 | 11.0 | 0.147 | -125.9 | 172.4 | NA | NA | NA | ||||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | GLY | A:120 | A:120 | 11.0 | 0.147 | -119.6 | -178.6 | 11.0 | 0.147 | 0.0 |
HOH |
6.204 |
O |
O |
|||
| GLY | B:120 | B:120 | 12.0 | 0.16 | -113.1 | -155.0 | 12.0 | 0.16 | 0.0 |
HOH |
7.886 |
N |
O |
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| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | GLY | A:120 | A:120 | 1.0 | 0.013 | -138.7 | 10.0 | 1.0 | 0.013 | 0.0 |
HOH |
2.861 |
O |
O |
|||
| GLY | B:120 | B:120 | 1.0 | 0.013 | -125.3 | 90.2 | 1.0 | 0.013 | 0.0 |
HOH |
3.705 |
N |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | GLY | A:120 | A:120 | 12.0 | 0.16 | -141.6 | 163.4 | 12.0 | 0.16 | 0.0 |
HOH |
2.929 |
N |
O |
|||
| GLY | B:120 | B:120 | 12.0 | 0.16 | -112.0 | 174.0 | NA | NA | NA | ||||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | GLY | A:120 | A:120 | 10.0 | 0.133 | -127.4 | 163.7 | 10.0 | 0.133 | 0.0 |
HOH |
3.120 |
O |
O |
|||
| GLY | B:120 | B:120 | 11.0 | 0.147 | -126.2 | 168.5 | NA | NA | NA | ||||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | GLY | A:120 | A:120 | 11.0 | 0.147 | -119.1 | 169.1 | 11.0 | 0.147 | 0.0 |
HOH |
3.084 |
N |
O |
|||
| GLY | B:120 | B:120 | 13.0 | 0.173 | -122.8 | 179.4 | NA | NA | NA | ||||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | GLY | A:120 | A:120 | 10.0 | 0.133 | -106.5 | 168.9 | NA | NA | NA | |||||||
| GLY | B:120 | B:120 | 11.0 | 0.147 | -112.9 | 178.8 | 11.0 | 0.147 | 0.0 |
HOH |
2.143 |
H |
O |
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| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | GLY | A:142 | A:139 | 10.0 | 0.133 | -117.6 | 177.8 | 10.0 | 0.133 | 0.0 |
HOH |
3.647 |
CA |
O |
|||
| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | GLY | A:142 | A:139 | 10.0 | 0.133 | -121.1 | 164.1 | 10.0 | 0.133 | 0.0 |
HOH |
2.109 |
N |
O |
|||
| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | GLY | A:142 | A:139 | 11.0 | 0.147 | -113.9 | -178.7 | 11.0 | 0.147 | 0.0 |
HOH |
3.647 |
CA |
O |
|||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | GLY | A:121 | A:121 | 11.0 | 0.147 | -100.9 | -164.3 | ||