Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64095636 | . | G | A | CCDS625.1:NM_002633.2:c.433Gat>Aat_NP_002624.2:p.145D>N | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | ASP | A:168 | A:145 | 78.0 | 0.52 | H | -59.1 | -45.2 | 78.0 | 0.52 | 0.0 |
HOH |
2.890 |
OD2 |
O |
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ASP | B:168 | B:145 | 88.0 | 0.587 | H | -70.9 | -35.9 | NA | NA | NA | |||||||||||||
6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | ASP | A:168 | B:145 | 71.0 | 0.473 | H | -66.0 | -40.0 | 71.0 | 0.473 | 0.0 |
HOH |
3.978 |
CB |
O |
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ASP | B:168 | A:145 | 89.0 | 0.593 | H | -64.9 | -45.0 | NA | NA | NA | |||||||||||||
5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ASP | A:168 | A:145 | 106.0 | 0.707 | H | -59.5 | -45.3 | 106.0 | 0.707 | 0.0 |
HOH |
7.328 |
OD1 |
O |
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ASP | B:168 | B:145 | 58.0 | NA | H | -69.3 | -35.1 | NA | NA | NA | |||||||||||||
6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | ASP | A:168 | A:145 | 83.0 | 0.553 | H | -60.5 | -42.5 | 83.0 | 0.553 | 0.0 |
HOH |
3.634 |
CB |
O |
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ASP | B:168 | B:145 | 59.0 | NA | H | -65.9 | -44.4 | NA | NA | NA | |||||||||||||
5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ASP | A:147 | A:145 | 74.0 | 0.493 | H | -61.6 | -42.7 | 74.0 | 0.493 | 0.0 |
HOH |
3.319 |
CB |
O |
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5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ASP | B:147 | B:145 | 98.0 | 0.653 | H | -63.5 | -44.9 | NA | NA | NA | ||||||
5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ASP | A:145 | A:145 | 85.0 | 0.567 | H | -65.0 | -44.7 | 85.0 | 0.567 | 0.0 | ||||||
ASP | B:145 | B:145 | 107.0 | 0.713 | H | -66.2 | -48.6 | NA | NA | NA | |||||||||||||
5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ASP | A:145 | A:145 | 87.0 | 0.58 | H | -62.8 | -42.2 | 87.0 | 0.58 | 0.0 | ||||||
ASP | B:145 | B:145 | 91.0 | 0.607 | H | -59.2 | -42.6 | NA | NA | NA | |||||||||||||
5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ASP | A:168 | A:145 | 72.0 | 0.48 | H | -72.5 | -49.5 | 72.0 | 0.48 | 0.0 |
HOH |
6.366 |
OD2 |
O |
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ASP | B:168 | B:145 | 103.0 | 0.687 | H | -85.6 | -50.3 | NA | NA | NA | |||||||||||||
5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ASP | A:168 | A:145 | 81.0 | 0.54 | H | -61.1 | -48.2 | 81.0 | 0.54 | 0.0 |
HOH |
2.921 |
OD1 |
O |
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ASP | B:168 | B:145 | 102.0 | 0.68 | H | -65.4 | -40.5 | NA | NA | NA | |||||||||||||
5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ASP | A:168 | A:145 | 88.0 | 0.587 | H | -59.8 | -47.8 | 88.0 | 0.587 | 0.0 |
HOH |
4.581 |
OD1 |
O |
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ASP | B:168 | B:145 | 58.0 | NA | H | -72.8 | -36.3 | NA | NA | NA | |||||||||||||
5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ASP | A:168 | A:145 | 69.0 | 0.46 | H | -60.2 | -43.7 | 69.0 | 0.46 | 0.0 |
HOH |
2.402 |
OD2 |
O |
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ASP | B:168 | B:145 | 91.0 | 0.607 | H | -67.3 | -41.0 | NA | NA | NA | |||||||||||||
1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | ASP | A:144 | A:144 | 73.0 | 0.487 | H | -65.8 | -36.6 | 73.0 | 0.487 | 0.0 |
HOH |
4.635 |
N |
O |
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ASP | B:144 | B:144 | 58.0 | 0.387 | H | -64.4 | -43.6 | 58.0 | 0.387 | 0.0 |
HOH |
6.333 |
N |
O |
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1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | ASP | A:144 | A:144 | 46.0 | 0.307 | H | -63.6 | -31.2 | 46.0 | 0.307 | 0.0 |
HOH |
6.944 |
N |
O |
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ASP | B:144 | B:144 | 59.0 | 0.393 | H | -72.3 | -44.4 | 59.0 | 0.393 | 0.0 |
HOH |
6.437 |
N |
O |
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1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | ASP | A:144 | A:144 | 60.0 | 0.4 | H | -71.3 | -36.1 | 60.0 | 0.4 | 0.0 |
HOH |
2.977 |
OD2 |
O |
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ASP | B:144 | B:144 | 72.0 | 0.48 | H | -68.4 | -53.1 | NA | NA | NA | |||||||||||||
1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | ASP | A:144 | A:144 | 53.0 | 0.353 | H | -70.9 | -34.1 | 53.0 | 0.353 | 0.0 |
HOH |
2.727 |
OD2 |
O |
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ASP | B:144 | B:144 | 61.0 | 0.407 | H | -61.1 | -57.4 | NA | NA | NA | |||||||||||||
1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | ASP | A:144 | A:144 | 58.0 | 0.387 | H | -69.2 | -36.1 | 58.0 | 0.387 | 0.0 |
HOH |
2.737 |
OD2 |
O |
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ASP | B:144 | B:144 | 71.0 | 0.473 | H | -68.0 | -53.9 | NA | NA | NA | |||||||||||||
3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | ASP | A:144 | A:144 | 63.0 | 0.42 | H | -67.6 | -42.9 | NA | NA | NA | ||||||
ASP | B:144 | B:144 | 42.0 | 0.28 | H | -66.5 | -50.9 | 42.0 | 0.28 | 0.0 |
HOH |
2.357 |
OD2 |
H1 |
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6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ASP | A:166 | A:163 | 48.0 | 0.32 | H | -66.9 | -39.2 | 48.0 | 0.32 | 0.0 |
HOH |
8.776 |
O |
O |
||
6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ASP | A:166 | A:163 | 52.0 | 0.347 | H | -54.1 | -74.0 | 52.0 | 0.347 | 0.0 |
HOH |
3.711 |
OD1 |
O |
||
6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ASP | A:166 | A:163 | 71.0 | 0.473 | H | -63.7 | -44.2 | 71.0 | 0.473 | 0.0 |
HOH |
8.881 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | ASP | A:145 | A:145 | 61.0 | 0.407 | H | -71.0 | -37.1 |