Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64095714 | . | G | A | CCDS625.1:NM_002633.2:c.511Gga>Aga_NP_002624.2:p.171G>R | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | GLY | A:194 | A:171 | 30.0 | 0.4 | E | 123.5 | -169.9 | 30.0 | 0.4 | 0.0 |
HOH |
2.992 |
O |
O |
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| GLY | B:194 | B:171 | 29.0 | 0.387 | E | 121.2 | -169.8 | NA | NA | NA | |||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | GLY | A:194 | B:171 | 30.0 | 0.4 | E | 132.8 | -168.0 | 30.0 | 0.4 | 0.0 |
HOH |
2.973 |
O |
O |
||
| GLY | B:194 | A:171 | 31.0 | 0.413 | E | 116.9 | -170.1 | NA | NA | NA | |||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | GLY | A:194 | A:171 | 37.0 | 0.493 | E | 123.2 | -168.9 | 37.0 | 0.493 | 0.0 |
HOH |
2.718 |
O |
O |
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| GLY | B:194 | B:171 | 34.0 | 0.453 | E | 117.6 | -170.1 | NA | NA | NA | |||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | GLY | A:194 | A:171 | 33.0 | 0.44 | E | 115.1 | -170.6 | 33.0 | 0.44 | 0.0 |
HOH |
2.748 |
O |
O |
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| GLY | B:194 | B:171 | 32.0 | 0.427 | E | 117.0 | -172.9 | NA | NA | NA | |||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | GLY | A:173 | A:171 | 29.0 | 0.387 | E | 120.0 | -170.4 | 29.0 | 0.387 | 0.0 |
SO4 HOH |
8.446 2.921 |
CA O |
O1 O |
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| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | GLY | B:173 | B:171 | 30.0 | 0.4 | E | 117.0 | -167.2 | NA | NA | NA | ||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | GLY | A:171 | A:171 | 31.0 | 0.413 | E | 114.7 | -178.7 | 31.0 | 0.413 | 0.0 |
HOH |
5.385 |
N |
O |
||
| GLY | B:171 | B:171 | 31.0 | 0.413 | E | 112.9 | -177.6 | NA | NA | NA | |||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | GLY | A:171 | A:171 | 28.0 | 0.373 | E | 118.5 | -174.4 | 28.0 | 0.373 | 0.0 |
SO4 HOH |
7.087 2.927 |
C O |
O2 O |
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| GLY | B:171 | B:171 | 28.0 | 0.373 | E | 118.7 | -173.9 | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | GLY | A:194 | A:171 | 34.0 | 0.453 | E | 104.8 | -170.9 | 34.0 | 0.453 | 0.0 |
HOH |
2.786 |
O |
O |
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| GLY | B:194 | B:171 | 38.0 | 0.507 | E | 107.5 | 178.8 | NA | NA | NA | |||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | GLY | A:194 | A:171 | 36.0 | 0.48 | E | 125.2 | -170.3 | 36.0 | 0.48 | 0.0 |
HOH |
2.875 |
O |
O |
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| GLY | B:194 | B:171 | 31.0 | 0.413 | E | 122.4 | -169.9 | NA | NA | NA | |||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | GLY | A:194 | A:171 | 30.0 | 0.4 | E | 117.8 | -176.3 | 30.0 | 0.4 | 0.0 |
HOH |
2.883 |
O |
O |
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| GLY | B:194 | B:171 | 35.0 | 0.467 | E | 117.6 | -175.8 | NA | NA | NA | |||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | GLY | A:194 | A:171 | 30.0 | 0.4 | E | 119.5 | -166.9 | 30.0 | 0.4 | 0.0 |
HOH |
2.864 |
O |
O |
||
| GLY | B:194 | B:171 | 30.0 | 0.4 | E | 119.6 | -167.3 | NA | NA | NA | |||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | GLY | A:170 | A:170 | 36.0 | 0.48 | E | 114.4 | 178.5 | 4.0 | 0.053 | 0.427 |
B:P00949:0.427 |
HOH |
4.470 |
CA |
O |
|
| GLY | B:170 | B:170 | 37.0 | 0.493 | E | 119.4 | -176.4 | 4.0 | 0.053 | 0.44 |
A:P00949:0.44 |
HOH |
5.066 |
N |
O |
||||||||
| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | GLY | A:170 | A:170 | 34.0 | 0.453 | E | 143.3 | 170.1 | 3.0 | 0.04 | 0.413 |
B:P00949:0.413 |
HOH |
3.875 |
CA |
O |
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| GLY | B:170 | B:170 | 35.0 | 0.467 | E | 117.0 | 166.8 | 1.0 | 0.013 | 0.454 |
A:P00949:0.453 |
HOH |
5.020 |
N |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | GLY | A:170 | A:170 | 35.0 | 0.467 | E | 107.5 | -179.7 | 35.0 | 0.467 | 0.0 |
HOH |
2.717 |
O |
O |
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| GLY | B:170 | B:170 | 36.0 | 0.48 | E | 95.9 | -173.5 | NA | NA | NA | |||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | GLY | A:170 | A:170 | 37.0 | 0.493 | E | 96.5 | 174.5 | 37.0 | 0.493 | 0.0 |
HOH |
2.759 |
O |
O |
||
| GLY | B:170 | B:170 | 32.0 | 0.427 | E | 101.7 | -170.6 | NA | NA | NA | |||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | GLY | A:170 | A:170 | 34.0 | 0.453 | E | 105.8 | -172.6 | 34.0 | 0.453 | 0.0 |
HOH |
2.952 |
O |
O |
||
| GLY | B:170 | B:170 | 34.0 | 0.453 | E | 106.8 | -162.3 | NA | NA | NA | |||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | GLY | A:170 | A:170 | 33.0 | 0.44 | E | 111.8 | 179.4 | NA | NA | NA | ||||||
| GLY | B:170 | B:170 | 31.0 | 0.413 | E | 121.0 | -177.3 | 31.0 | 0.413 | 0.0 |
HOH |
1.810 |
O |
H2 |
|||||||||
| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | GLY | A:192 | A:189 | 33.0 | 0.44 | E | 116.5 | -175.9 | 33.0 | 0.44 | 0.0 |
HOH |
2.497 |
O |
O |
||
| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | GLY | A:192 | A:189 | 34.0 | 0.453 | E | 115.9 | -177.7 | 34.0 | 0.453 | 0.0 |
HOH |
8.617 |
O |
O |
||
| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | GLY | A:192 | A:189 | 33.0 | 0.44 | E | 116.7 | -173.2 | 33.0 | 0.44 | 0.0 |
HOH |
3.142 |
O |
O |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | GLY | A:171 | A:171 | 38.0 | 0.507 | E | 110.8 | -167.9 | |