Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64097420 | . | C | A | CCDS625.1:NM_002633.2:c.649Cga>Aga_NP_002624.2:p.217R>R | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | ARG | A:240 | A:217 | 77.0 | 0.342 | -57.3 | 148.9 | 77.0 | 0.342 | 0.0 |
SO4 HOH |
2.699 2.762 |
NH2 O |
O2 O |
|||
| ARG | B:240 | B:217 | 114.0 | 0.507 | -71.2 | 167.6 | NA | NA | NA | ||||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | ARG | A:240 | B:217 | 66.0 | 0.293 | -58.5 | 142.4 | 66.0 | 0.293 | 0.0 |
HOH |
2.951 |
O |
O |
|||
| ARG | B:240 | A:217 | 75.0 | 0.333 | -65.3 | 158.5 | NA | NA | NA | ||||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ARG | A:240 | A:217 | 93.0 | 0.413 | -65.5 | 149.8 | 93.0 | 0.413 | 0.0 |
SO4 GOL HOH |
8.792 2.794 3.326 |
NH2 NH2 NH1 |
O4 O3 O |
|||
| ARG | B:240 | B:217 | 23.0 | NA | -64.9 | 166.6 | NA | NA | NA | ||||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | ARG | A:240 | A:217 | 84.0 | 0.373 | -59.1 | 149.6 | 84.0 | 0.373 | 0.0 |
SO4 HOH |
2.483 2.852 |
NH2 O |
O2 O |
|||
| ARG | B:240 | B:217 | 107.0 | 0.476 | -67.3 | 157.2 | NA | NA | NA | ||||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ARG | A:219 | A:217 | 75.0 | 0.333 | -62.2 | 153.7 | 75.0 | 0.333 | 0.0 |
SO4 SO4 HOH |
2.804 7.560 2.676 |
NH2 NH2 O |
O1 O4 O |
|||
| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ARG | B:219 | B:217 | 87.0 | 0.387 | -70.1 | 161.4 | NA | NA | NA | |||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ARG | A:217 | A:217 | 79.0 | 0.351 | -63.8 | 156.8 | 79.0 | 0.351 | 0.0 |
SO4 HOH |
2.676 4.293 |
NH2 NE |
O1 O |
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| ARG | B:217 | B:217 | 120.0 | 0.533 | -64.1 | 154.6 | NA | NA | NA | ||||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ARG | A:217 | A:217 | 73.0 | 0.324 | -54.4 | 143.4 | 73.0 | 0.324 | 0.0 |
HOH |
3.840 |
NE |
O |
|||
| ARG | B:217 | B:217 | 104.0 | 0.462 | -58.3 | 149.3 | NA | NA | NA | ||||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ARG | A:240 | A:217 | 102.0 | 0.453 | -58.7 | 146.8 | 102.0 | 0.453 | 0.0 |
SO4 HOH |
2.861 2.706 |
NH2 O |
O2 O |
|||
| ARG | B:240 | B:217 | 110.0 | NA | 360.0 | 141.2 | NA | NA | NA | ||||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ARG | A:240 | A:217 | 77.0 | 0.342 | -50.4 | 152.6 | 77.0 | 0.342 | 0.0 |
SO4 HOH |
2.814 2.782 |
NH2 O |
O2 O |
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| ARG | B:240 | B:217 | 86.0 | 0.382 | S | -56.7 | 153.6 | NA | NA | NA | |||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ARG | A:240 | A:217 | 88.0 | 0.391 | -65.4 | 148.2 | 88.0 | 0.391 | 0.0 |
SO4 GOL HOH |
2.609 7.255 2.632 |
NH1 NH2 NH1 |
O2 C1 O |
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| ARG | B:240 | B:217 | 81.0 | 0.36 | -63.7 | 165.0 | NA | NA | NA | ||||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ARG | A:240 | A:217 | 78.0 | 0.347 | -61.6 | 149.9 | 78.0 | 0.347 | 0.0 |
SO4 GOL HOH |
2.593 7.752 2.671 |
NH2 CZ O |
O2 O2 O |
|||
| ARG | B:240 | B:217 | 82.0 | 0.364 | -65.7 | 155.5 | NA | NA | NA | ||||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | ARG | A:216 | A:216 | 109.0 | 0.484 | 47.9 | 86.9 | 109.0 | 0.484 | 0.0 |
HOH |
8.150 |
O |
O |
|||
| ARG | B:216 | B:216 | 97.0 | 0.431 | -79.0 | 165.9 | 97.0 | 0.431 | 0.0 |
HOH |
9.596 |
O |
O |
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| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | ARG | A:216 | A:216 | 104.0 | 0.462 | 78.8 | 105.8 | 104.0 | 0.462 | 0.0 |
HOH |
6.355 |
NH1 |
O |
|||
| ARG | B:216 | B:216 | 102.0 | 0.453 | -95.5 | 130.5 | 102.0 | 0.453 | 0.0 |
HOH |
9.822 |
O |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | ARG | A:216 | A:216 | 110.0 | 0.489 | 15.2 | 100.2 | 110.0 | 0.489 | 0.0 |
HOH |
2.830 |
NE |
O |
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| ARG | B:216 | B:216 | 83.0 | 0.369 | -62.6 | 143.9 | NA | NA | NA | ||||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | ARG | A:216 | A:216 | 104.0 | 0.462 | 12.2 | 99.5 | 104.0 | 0.462 | 0.0 |
HOH |
2.929 |
NH2 |
O |
|||
| ARG | B:216 | B:216 | 98.0 | 0.436 | -71.3 | 159.9 | NA | NA | NA | ||||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | ARG | A:216 | A:216 | 107.0 | 0.476 | 19.9 | 100.6 | 107.0 | 0.476 | 0.0 |
HOH |
3.272 |
NE |
O |
|||
| ARG | B:216 | B:216 | 83.0 | 0.369 | -64.9 | 155.5 | NA | NA | NA | ||||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | ARG | A:216 | A:216 | 105.0 | 0.467 | 18.2 | 101.3 | NA | NA | NA | |||||||
| ARG | B:216 | B:216 | 78.0 | 0.347 | -72.8 | 163.4 | 78.0 | 0.347 | 0.0 |
HOH |
1.861 |
O |
H1 |
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| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ARG | A:238 | A:235 | 106.0 | 0.471 | -68.0 | 157.0 | 106.0 | 0.471 | 0.0 |
HOH |
6.291 |
N |
O |
|||
| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ARG | A:238 | A:235 | 82.0 | 0.364 | -84.0 | 152.4 | 82.0 | 0.364 | 0.0 | |||||||
| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ARG | A:238 | A:235 | 69.0 | 0.307 | -62.7 | 158.9 | 69.0 | 0.307 | 0.0 | |||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | ARG | A:217 | A:217 | 85.0 | 0.378 | -56.5 | 146.8 | ||