Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64097442 | . | C | A | CCDS625.1:NM_002633.2:c.671gCt>gAt_NP_002624.2:p.224A>D | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | ALA | A:247 | A:224 | 0.0 | 0.0 | -86.1 | 1.6 | 0.0 | 0.0 | 0.0 |
HOH |
2.745 |
O |
O |
|||
ALA | B:247 | B:224 | 0.0 | 0.0 | -84.3 | 3.4 | NA | NA | NA | ||||||||||||||
6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | ALA | A:247 | B:224 | 0.0 | 0.0 | -85.3 | 2.1 | 0.0 | 0.0 | 0.0 |
HOH |
2.709 |
O |
O |
|||
ALA | B:247 | A:224 | 0.0 | 0.0 | -81.4 | -2.3 | NA | NA | NA | ||||||||||||||
5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ALA | A:247 | A:224 | 0.0 | 0.0 | -85.4 | 3.7 | 0.0 | 0.0 | 0.0 |
HOH |
3.803 |
CB |
O |
|||
ALA | B:247 | B:224 | 0.0 | 0.0 | -84.7 | 4.3 | NA | NA | NA | ||||||||||||||
6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | ALA | A:247 | A:224 | 0.0 | 0.0 | -82.2 | -2.3 | 0.0 | 0.0 | 0.0 |
HOH |
2.621 |
O |
O |
|||
ALA | B:247 | B:224 | 0.0 | 0.0 | -82.9 | 0.3 | NA | NA | NA | ||||||||||||||
5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ALA | A:226 | A:224 | 0.0 | 0.0 | -82.2 | -1.6 | 0.0 | 0.0 | 0.0 |
HOH |
2.814 |
O |
O |
|||
5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ALA | B:226 | B:224 | 0.0 | 0.0 | -77.8 | 2.9 | NA | NA | NA | |||||||
5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ALA | A:224 | A:224 | 0.0 | 0.0 | -89.1 | 1.8 | 0.0 | 0.0 | 0.0 |
HOH |
7.433 |
N |
O |
|||
ALA | B:224 | B:224 | 0.0 | 0.0 | -91.6 | 1.1 | NA | NA | NA | ||||||||||||||
5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ALA | A:224 | A:224 | 1.0 | 0.009 | -84.3 | 2.5 | 1.0 | 0.009 | 0.0 |
HOH |
6.840 |
O |
O |
|||
ALA | B:224 | B:224 | 1.0 | 0.009 | -85.4 | 3.7 | NA | NA | NA | ||||||||||||||
5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ALA | A:247 | A:224 | 0.0 | 0.0 | -90.7 | 3.4 | 0.0 | 0.0 | 0.0 |
HOH |
7.371 |
O |
O |
|||
ALA | B:247 | B:224 | 0.0 | 0.0 | -89.6 | -0.4 | NA | NA | NA | ||||||||||||||
5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ALA | A:247 | A:224 | 0.0 | 0.0 | -87.6 | 5.0 | 0.0 | 0.0 | 0.0 |
HOH |
2.785 |
O |
O |
|||
ALA | B:247 | B:224 | 0.0 | 0.0 | -82.4 | 1.3 | NA | NA | NA | ||||||||||||||
5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ALA | A:247 | A:224 | 0.0 | 0.0 | -84.6 | -1.6 | 0.0 | 0.0 | 0.0 |
HOH |
2.750 |
O |
O |
|||
ALA | B:247 | B:224 | 0.0 | 0.0 | -74.0 | -7.3 | NA | NA | NA | ||||||||||||||
5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ALA | A:247 | A:224 | 0.0 | 0.0 | -84.6 | 1.6 | 0.0 | 0.0 | 0.0 |
HOH |
2.746 |
O |
O |
|||
ALA | B:247 | B:224 | 0.0 | 0.0 | -82.1 | 2.0 | NA | NA | NA | ||||||||||||||
1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | ALA | A:223 | A:223 | 0.0 | 0.0 | -87.3 | 1.1 | 0.0 | 0.0 | 0.0 |
HOH |
3.118 |
CB |
O |
|||
ALA | B:223 | B:223 | 0.0 | 0.0 | -81.5 | 5.4 | 0.0 | 0.0 | 0.0 |
HOH |
3.165 |
O |
O |
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1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | ALA | A:223 | A:223 | 0.0 | 0.0 | -77.7 | -4.6 | 0.0 | 0.0 | 0.0 |
HOH |
3.366 |
CB |
O |
|||
ALA | B:223 | B:223 | 0.0 | 0.0 | -79.1 | -0.2 | 0.0 | 0.0 | 0.0 |
HOH |
3.340 |
O |
O |
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1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | ALA | A:223 | A:223 | 0.0 | 0.0 | -97.0 | 15.9 | 0.0 | 0.0 | 0.0 |
HOH |
2.827 |
O |
O |
|||
ALA | B:223 | B:223 | 0.0 | 0.0 | -100.6 | 8.5 | NA | NA | NA | ||||||||||||||
1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | ALA | A:223 | A:223 | 1.0 | 0.009 | -107.5 | 13.1 | 1.0 | 0.009 | 0.0 |
HOH |
2.810 |
O |
O |
|||
ALA | B:223 | B:223 | 0.0 | 0.0 | -116.0 | 7.9 | NA | NA | NA | ||||||||||||||
1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | ALA | A:223 | A:223 | 0.0 | 0.0 | -93.9 | 7.7 | 0.0 | 0.0 | 0.0 |
HOH |
3.358 |
O |
O |
|||
ALA | B:223 | B:223 | 0.0 | 0.0 | -85.4 | 2.7 | NA | NA | NA | ||||||||||||||
3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | ALA | A:223 | A:223 | 0.0 | 0.0 | -99.8 | 1.3 | NA | NA | NA | |||||||
ALA | B:223 | B:223 | 0.0 | 0.0 | -94.7 | 6.9 | 0.0 | 0.0 | 0.0 |
HOH |
1.922 |
O |
H1 |
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6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ALA | A:245 | A:242 | 0.0 | 0.0 | -86.8 | -3.0 | 0.0 | 0.0 | 0.0 |
HOH |
8.002 |
N |
O |
|||
6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ALA | A:245 | A:242 | 0.0 | 0.0 | -80.5 | -0.9 | 0.0 | 0.0 | 0.0 |
HOH |
3.596 |
CB |
O |
|||
6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ALA | A:245 | A:242 | 1.0 | 0.009 | -78.9 | -5.8 | 1.0 | 0.009 | 0.0 |
HOH |
3.126 |
O |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | ALA | A:224 | A:224 | 0.0 | 0.0 | -86.1 | 2.7 |