Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64100551 | . | C | A | CCDS625.1:NM_002633.2:c.734gCg>gAg_NP_002624.2:p.245A>E | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | ALA | A:268 | A:245 | 78.0 | 0.678 | G | -56.3 | -30.0 | 78.0 | 0.678 | 0.0 |
SO4 HOH |
5.399 3.202 |
N N |
O1 O |
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| ALA | B:268 | B:245 | 76.0 | 0.661 | G | -58.9 | -23.2 | NA | NA | NA | |||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | ALA | A:268 | B:245 | 78.0 | 0.678 | G | -65.7 | -27.5 | 78.0 | 0.678 | 0.0 |
HOH |
3.206 |
O |
O |
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| ALA | B:268 | A:245 | 83.0 | 0.722 | G | -64.5 | -18.0 | NA | NA | NA | |||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ALA | A:268 | A:245 | 77.0 | 0.67 | G | -55.3 | -31.0 | 77.0 | 0.67 | 0.0 |
SO4 GOL HOH |
2.645 5.241 9.271 |
N N CB |
O3 C1 O |
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| ALA | B:268 | B:245 | 84.0 | 0.73 | G | -58.8 | -21.2 | NA | NA | NA | |||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | ALA | A:268 | A:245 | 76.0 | 0.661 | G | -62.2 | -33.1 | 76.0 | 0.661 | 0.0 |
SO4 HOH |
5.327 2.935 |
N O |
O1 O |
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| ALA | B:268 | B:245 | 75.0 | 0.652 | G | -58.9 | -35.5 | NA | NA | NA | |||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ALA | A:247 | A:245 | 79.0 | 0.687 | G | -59.9 | -32.6 | 79.0 | 0.687 | 0.0 |
SO4 SO4 HOH |
5.578 2.573 2.788 |
N N O |
O2 O3 O |
||
| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ALA | B:247 | B:245 | 79.0 | 0.687 | G | -55.9 | -30.4 | NA | NA | NA | ||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ALA | A:245 | A:245 | 78.0 | 0.678 | G | -57.7 | -37.2 | 78.0 | 0.678 | 0.0 |
SO4 HOH |
6.144 6.902 |
N N |
O2 O |
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| ALA | B:245 | B:245 | 77.0 | 0.67 | G | -56.7 | -35.2 | NA | NA | NA | |||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ALA | A:245 | A:245 | 80.0 | 0.696 | G | -64.3 | -22.0 | 80.0 | 0.696 | 0.0 |
HOH |
5.875 |
O |
O |
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| ALA | B:245 | B:245 | 89.0 | 0.774 | G | -63.9 | -19.7 | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ALA | A:268 | A:245 | 77.0 | 0.67 | G | -61.6 | -33.5 | 77.0 | 0.67 | 0.0 |
SO4 HOH |
5.445 6.815 |
N CB |
O3 O |
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| ALA | B:268 | B:245 | 86.0 | 0.748 | G | -60.9 | -22.4 | NA | NA | NA | |||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ALA | A:268 | A:245 | 79.0 | 0.687 | G | -55.5 | -32.7 | 79.0 | 0.687 | 0.0 |
SO4 HOH |
5.397 2.820 |
N O |
O1 O |
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| ALA | B:268 | B:245 | 78.0 | 0.678 | G | -58.6 | -27.9 | NA | NA | NA | |||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ALA | A:268 | A:245 | 71.0 | 0.617 | G | -59.9 | -28.6 | 71.0 | 0.617 | 0.0 |
SO4 GOL HOH |
5.528 3.389 2.793 |
N N O |
O1 O3 O |
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| ALA | B:268 | B:245 | 76.0 | 0.661 | G | -59.5 | -13.6 | NA | NA | NA | |||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ALA | A:268 | A:245 | 76.0 | 0.661 | G | -59.2 | -32.9 | 76.0 | 0.661 | 0.0 |
SO4 GOL HOH |
5.302 3.117 2.934 |
N N O |
O1 C2 O |
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| ALA | B:268 | B:245 | 76.0 | 0.661 | G | -58.6 | -32.0 | NA | NA | NA | |||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | ALA | A:244 | A:244 | 74.0 | 0.643 | G | -45.5 | -33.0 | 74.0 | 0.643 | 0.0 |
HOH |
4.363 |
CB |
O |
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| ALA | B:244 | B:244 | 79.0 | 0.687 | G | -51.2 | -28.7 | 79.0 | 0.687 | 0.0 |
HOH |
4.521 |
CB |
O |
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| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | ALA | A:244 | A:244 | 76.0 | 0.661 | G | -49.8 | -39.1 | 76.0 | 0.661 | 0.0 |
HOH |
4.278 |
N |
O |
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| ALA | B:244 | B:244 | 62.0 | 0.539 | G | -53.6 | -29.3 | 62.0 | 0.539 | 0.0 |
HOH |
6.726 |
O |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | ALA | A:244 | A:244 | 77.0 | 0.67 | G | -53.4 | -29.7 | 77.0 | 0.67 | 0.0 |
HOH |
4.228 |
CB |
O |
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| ALA | B:244 | B:244 | 78.0 | 0.678 | G | -53.9 | -27.7 | NA | NA | NA | |||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | ALA | A:244 | A:244 | 80.0 | 0.696 | G | -33.7 | -30.2 | 80.0 | 0.696 | 0.0 |
HOH |
2.803 |
N |
O |
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| ALA | B:244 | B:244 | 82.0 | 0.713 | G | -41.6 | -27.5 | NA | NA | NA | |||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | ALA | A:244 | A:244 | 72.0 | 0.626 | G | -47.0 | -30.1 | 72.0 | 0.626 | 0.0 |
HOH |
3.071 |
O |
O |
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| ALA | B:244 | B:244 | 83.0 | 0.722 | G | -51.2 | -26.1 | NA | NA | NA | |||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | ALA | A:244 | A:244 | 87.0 | 0.757 | G | -55.2 | -25.9 | NA | NA | NA | ||||||
| ALA | B:244 | B:244 | 77.0 | 0.67 | G | -55.5 | -25.2 | 77.0 | 0.67 | 0.0 |
HOH |
3.844 |
H |
O |
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| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ALA | A:266 | A:263 | 86.0 | 0.748 | G | -76.8 | -27.7 | 86.0 | 0.748 | 0.0 |
HOH |
7.369 |
O |
O |
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| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ALA | A:266 | A:263 | 87.0 | 0.757 | G | -66.5 | -24.1 | 87.0 | 0.757 | 0.0 | ||||||
| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ALA | A:266 | A:263 | 86.0 | 0.748 | G | -64.1 | -24.3 | 86.0 | 0.748 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | ALA | A:245 | A:245 | 83.0 | 0.722 | G | -56.3 | -29.2 | |