Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64100604 | . | G | A | CCDS625.1:NM_002633.2:c.787Gac>Aac_NP_002624.2:p.263D>N | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | ASP | A:286 | A:263 | 20.0 | 0.133 | -135.4 | 113.1 | 20.0 | 0.133 | 0.0 |
MG SO4 GOL HOH |
7.664 8.045 7.168 2.549 |
OD1 OD1 OD2 OD2 |
MG O4 O3 O |
|||
| ASP | B:286 | B:263 | 19.0 | 0.127 | -131.5 | 112.5 | NA | NA | NA | ||||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | ASP | A:286 | B:263 | 17.0 | 0.113 | -133.1 | 110.7 | 17.0 | 0.113 | 0.0 |
G6P MG HOH |
7.942 7.594 2.606 |
OD1 OD1 OD1 |
O1 MG O |
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| ASP | B:286 | A:263 | 16.0 | 0.107 | -129.2 | 113.5 | NA | NA | NA | ||||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ASP | A:286 | A:263 | 17.0 | 0.113 | -134.2 | 112.8 | 17.0 | 0.113 | 0.0 |
SO4 SO4 CO HOH |
5.060 7.025 8.021 9.775 |
OD2 CB OD1 OD1 |
O4 O1 CO O |
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| ASP | B:286 | B:263 | 32.0 | 0.213 | -130.1 | 112.1 | NA | NA | NA | ||||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | ASP | A:286 | A:263 | 17.0 | 0.113 | -134.8 | 110.4 | 17.0 | 0.113 | 0.0 |
MG SO4 HOH |
7.694 8.248 2.556 |
OD1 OD2 OD1 |
MG O1 O |
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| ASP | B:286 | B:263 | 15.0 | 0.1 | -126.6 | 114.0 | NA | NA | NA | ||||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ASP | A:265 | A:263 | 19.0 | 0.127 | -133.0 | 110.0 | 19.0 | 0.127 | 0.0 |
MG HOH |
7.938 2.622 |
OD1 OD2 |
MG O |
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| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ASP | B:265 | B:263 | 17.0 | 0.113 | -133.7 | 106.6 | NA | NA | NA | |||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ASP | A:263 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| ASP | B:263 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ASP | A:263 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| ASP | B:263 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | GLY | A:286 | A:263 | 4.0 | 0.053 | -100.8 | 130.5 | 4.0 | 0.053 | 0.0 |
SO4 CA HOH |
6.664 8.164 3.442 |
N CA CA |
O2 CA O |
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| GLY | B:286 | B:263 | 10.0 | 0.133 | S | -133.8 | 130.9 | NA | NA | NA | |||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | TYR | A:286 | A:263 | 23.0 | 0.1 | -121.7 | 129.5 | 23.0 | 0.1 | 0.0 |
SO4 SO4 CA HOH |
9.000 7.062 7.117 2.731 |
OH N CE1 OH |
O2 O2 CA O |
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| TYR | B:286 | B:263 | 25.0 | 0.109 | -119.7 | 126.4 | NA | NA | NA | ||||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ASP | A:286 | A:263 | 20.0 | 0.133 | -137.1 | 110.7 | 20.0 | 0.133 | 0.0 |
MG HOH |
8.012 2.677 |
OD1 OD1 |
MG O |
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| ASP | B:286 | B:263 | 16.0 | 0.107 | -130.2 | 109.5 | NA | NA | NA | ||||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ASP | A:286 | A:263 | 23.0 | 0.153 | -134.2 | 112.7 | 23.0 | 0.153 | 0.0 |
MG GOL HOH |
7.830 8.948 2.544 |
OD1 OD2 OD1 |
MG O2 O |
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| ASP | B:286 | B:263 | 13.0 | 0.087 | -129.8 | 111.3 | NA | NA | NA | ||||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | ASP | A:262 | A:262 | 19.0 | 0.127 | -126.7 | 118.2 | 19.0 | 0.127 | 0.0 |
G16 CD HOH |
7.469 7.558 4.166 |
OD2 OD2 OD1 |
O2P CD O |
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| ASP | B:262 | B:262 | 22.0 | 0.147 | -137.8 | 115.1 | 22.0 | 0.147 | 0.0 |
CD HOH |
7.675 3.391 |
OD1 OD1 |
CD O |
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| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | ASP | A:262 | A:262 | 14.0 | 0.093 | -61.2 | 111.4 | 14.0 | 0.093 | 0.0 |
CO VG1 HOH |
8.111 7.261 3.930 |
CA CB OD1 |
CO OV2 O |
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| ASP | B:262 | B:262 | 26.0 | 0.173 | -133.7 | 128.8 | 26.0 | 0.173 | 0.0 |
HOH |
3.032 |
OD2 |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | ASP | A:262 | A:262 | 19.0 | 0.127 | -117.1 | 110.2 | 19.0 | 0.127 | 0.0 |
CD HOH |
7.575 3.047 |
OD2 OD2 |
CD O |
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| ASP | B:262 | B:262 | 20.0 | 0.133 | -126.8 | 114.7 | NA | NA | NA | ||||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | ASP | A:262 | A:262 | 12.0 | 0.08 | -118.1 | 117.2 | 12.0 | 0.08 | 0.0 |
CD SO4 HOH |
7.831 6.671 3.067 |
OD1 OD1 OD1 |
CD O1 O |
|||
| ASP | B:262 | B:262 | 12.0 | 0.08 | -139.1 | 118.7 | NA | NA | NA | ||||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | ASP | A:262 | A:262 | 25.0 | 0.167 | -114.7 | 110.9 | 25.0 | 0.167 | 0.0 |
NI HOH |
7.850 2.857 |
OD2 OD2 |
NI O |
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| ASP | B:262 | B:262 | 23.0 | 0.153 | -129.2 | 113.8 | NA | NA | NA | ||||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | ASP | A:262 | A:262 | 19.0 | 0.127 | -122.1 | 115.2 | NA | NA | NA | |||||||
| ASP | B:262 | B:262 | 24.0 | 0.16 | -125.9 | 115.9 | 24.0 | 0.16 | 0.0 |
MG HOH |
7.904 2.025 |
OD1 OD1 |
MG H1 |
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| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ASP | A:284 | A:281 | 14.0 | 0.093 | -125.9 | 124.6 | 14.0 | 0.093 | 0.0 |
ZN G1P HOH |
7.097 8.158 2.236 |
OD1 OD1 OD2 |
ZN O6 O |
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| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ASP | A:284 | A:281 | 16.0 | 0.107 | -122.0 | 116.8 | 16.0 | 0.107 | 0.0 |
MG HOH |
7.442 6.821 |
OD1 O |
MG O |
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| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ASP | A:284 | A:281 | 16.0 | 0.107 | -120.1 | 118.9 | 16.0 | 0.107 | 0.0 |
ZN G6P HOH |
7.397 8.383 2.259 |
OD1 OD1 OD1 |
ZN O1 O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | ASP | A:263 | A:263 | 16.0 | 0.107 | -122.7 | 111.2 | ||