Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64100621 | . | T | A | CCDS625.1:NM_002633.2:c.804taT>taA_NP_002624.2:p.268Y>* | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | TYR | A:291 | A:268 | 108.0 | 0.47 | T | -65.3 | -33.4 | 108.0 | 0.47 | 0.0 |
GOL HOH |
9.922 2.800 |
CE2 O |
O3 O |
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| TYR | B:291 | B:268 | 103.0 | 0.448 | T | -69.5 | -22.3 | NA | NA | NA | |||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | TYR | A:291 | B:268 | 101.0 | 0.439 | T | -71.1 | -25.5 | 101.0 | 0.439 | 0.0 |
HOH |
2.628 |
O |
O |
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| TYR | B:291 | A:268 | 106.0 | 0.461 | T | -72.0 | -23.3 | NA | NA | NA | |||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | TYR | A:291 | A:268 | 107.0 | 0.465 | T | -65.7 | -32.4 | 107.0 | 0.465 | 0.0 |
SO4 SO4 GOL HOH |
7.313 3.176 8.147 6.760 |
CE2 CE1 O OH |
O4 O1 O3 O |
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| TYR | B:291 | B:268 | 102.0 | 0.443 | T | -66.7 | -21.5 | NA | NA | NA | |||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | TYR | A:291 | A:268 | 107.0 | 0.465 | T | -67.1 | -34.7 | 107.0 | 0.465 | 0.0 |
HOH |
2.703 |
O |
O |
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| TYR | B:291 | B:268 | 103.0 | 0.448 | T | -73.1 | -29.2 | NA | NA | NA | |||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | TYR | A:270 | A:268 | 104.0 | 0.452 | T | -67.7 | -30.0 | 104.0 | 0.452 | 0.0 |
SO4 HOH |
9.000 2.686 |
O O |
O1 O |
||
| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | TYR | B:270 | B:268 | 107.0 | 0.465 | T | -75.1 | -29.7 | NA | NA | NA | ||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | TYR | A:268 | A:268 | 175.0 | 0.761 | T | -84.0 | -32.6 | 175.0 | 0.761 | 0.0 |
HOH |
4.881 |
CD2 |
O |
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| TYR | B:268 | B:268 | 142.0 | NA | 360.0 | -145.7 | NA | NA | NA | ||||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | TYR | A:268 | A:268 | 59.0 | NA | 360.0 | -42.6 | 59.0 | NA | NA |
HOH |
7.584 |
CA |
O |
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| TYR | B:268 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | TYR | A:291 | A:268 | 116.0 | 0.504 | T | -90.7 | -29.4 | 116.0 | 0.504 | 0.0 |
SO4 HOH |
5.958 3.655 |
CE2 CD1 |
O4 O |
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| TYR | B:291 | B:268 | 79.0 | NA | 360.0 | -8.3 | NA | NA | NA | ||||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | TYR | A:291 | A:268 | 117.0 | 0.509 | T | -66.4 | -29.5 | 117.0 | 0.509 | 0.0 |
SO4 HOH |
3.732 2.691 |
CD1 O |
O2 O |
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| TYR | B:291 | B:268 | 117.0 | 0.509 | T | -64.4 | -29.6 | NA | NA | NA | |||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | TYR | A:291 | A:268 | 107.0 | 0.465 | T | -63.3 | -28.9 | 107.0 | 0.465 | 0.0 |
HOH |
2.574 |
O |
O |
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| TYR | B:291 | B:268 | 113.0 | 0.491 | T | -71.3 | -31.0 | NA | NA | NA | |||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | TYR | A:291 | A:268 | 103.0 | 0.448 | T | -66.9 | -33.7 | 103.0 | 0.448 | 0.0 |
HOH |
2.685 |
OH |
O |
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| TYR | B:291 | B:268 | 90.0 | 0.391 | T | -83.2 | -21.4 | NA | NA | NA | |||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | TYR | A:267 | A:267 | 78.0 | 0.339 | T | -82.6 | -32.4 | 78.0 | 0.339 | 0.0 |
HOH |
6.932 |
CE2 |
O |
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| TYR | B:267 | B:267 | 113.0 | 0.491 | T | -69.1 | -31.2 | 113.0 | 0.491 | 0.0 |
HOH |
2.696 |
O |
O |
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| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | TYR | A:267 | A:267 | 85.0 | 0.37 | T | -59.2 | -7.5 | 85.0 | 0.37 | 0.0 |
HOH |
4.526 |
CE2 |
O |
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| TYR | B:267 | B:267 | 84.0 | 0.365 | T | -60.1 | -33.4 | 84.0 | 0.365 | 0.0 |
HOH |
2.952 |
O |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | TYR | A:267 | A:267 | 79.0 | 0.343 | T | -80.7 | -26.5 | 79.0 | 0.343 | 0.0 |
HOH |
5.810 |
N |
O |
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| TYR | B:267 | B:267 | 119.0 | 0.517 | T | -70.4 | -32.2 | NA | NA | NA | |||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | TYR | A:267 | A:267 | 82.0 | 0.357 | T | -66.6 | -31.0 | 82.0 | 0.357 | 0.0 |
HOH |
5.963 |
N |
O |
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| TYR | B:267 | B:267 | 101.0 | 0.439 | T | -72.4 | -36.9 | NA | NA | NA | |||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | TYR | A:267 | A:267 | 74.0 | 0.322 | T | -69.6 | -31.5 | 74.0 | 0.322 | 0.0 |
HOH |
5.820 |
N |
O |
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| TYR | B:267 | B:267 | 110.0 | 0.478 | T | -71.3 | -34.1 | NA | NA | NA | |||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | TYR | A:267 | A:267 | 78.0 | 0.339 | T | -61.2 | -30.5 | NA | NA | NA | ||||||
| TYR | B:267 | B:267 | 115.0 | 0.5 | T | -67.1 | -30.6 | 115.0 | 0.5 | 0.0 |
HOH |
2.214 |
O |
H1 |
|||||||||
| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | TYR | A:289 | A:286 | 52.0 | 0.226 | T | -85.8 | -9.5 | 52.0 | 0.226 | 0.0 |
HOH |
2.473 |
O |
O |
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| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | TYR | A:289 | A:286 | 56.0 | 0.243 | T | -71.5 | -14.8 | 56.0 | 0.243 | 0.0 |
HOH |
2.898 |
O |
O |
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| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | TYR | A:289 | A:286 | 55.0 | 0.239 | T | -77.9 | -14.9 | 55.0 | 0.239 | 0.0 |
HOH |
3.134 |
O |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | TYR | A:268 | A:268 | 85.0 | 0.37 | T | -86.2 | -26.8 | |