Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64100688 | . | G | A | CCDS625.1:NM_002633.2:c.871Ggg>Agg_NP_002624.2:p.291G>R | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | GLY | A:314 | A:291 | 2.0 | 0.027 | S | 86.1 | 15.2 | 2.0 | 0.027 | 0.0 |
MG SO4 HOH |
4.736 8.949 2.786 |
N N O |
MG O1 O |
||
| GLY | B:314 | B:291 | 2.0 | 0.027 | S | 81.9 | 21.5 | NA | NA | NA | |||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | GLY | A:314 | B:291 | 2.0 | 0.027 | S | 91.3 | 15.3 | 2.0 | 0.027 | 0.0 |
G6P MG HOH |
9.752 4.768 2.784 |
C N O |
O2 MG O |
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| GLY | B:314 | A:291 | 2.0 | 0.027 | S | 91.5 | 13.8 | NA | NA | NA | |||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | GLY | A:314 | A:291 | 1.0 | 0.013 | S | 85.4 | 15.4 | 1.0 | 0.013 | 0.0 |
CO HOH |
5.149 2.759 |
N O |
CO O |
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| GLY | B:314 | B:291 | 1.0 | 0.013 | S | 81.4 | 21.9 | NA | NA | NA | |||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | GLY | A:314 | A:291 | 2.0 | 0.027 | S | 86.5 | 15.3 | 2.0 | 0.027 | 0.0 |
MG HOH |
5.138 2.660 |
N O |
MG O |
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| GLY | B:314 | B:291 | 2.0 | 0.027 | S | 81.1 | 22.0 | NA | NA | NA | |||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | GLY | A:293 | A:291 | 2.0 | 0.027 | S | 85.8 | 11.7 | 2.0 | 0.027 | 0.0 |
MG HOH |
4.916 2.750 |
N O |
MG O |
||
| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | GLY | B:293 | B:291 | 1.0 | 0.013 | S | 87.3 | 15.6 | NA | NA | NA | ||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | GLY | A:291 | A:291 | 2.0 | 0.027 | S | 89.9 | 7.8 | 2.0 | 0.027 | 0.0 |
MG HOH |
4.884 2.855 |
N O |
MG O |
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| GLY | B:291 | B:291 | 2.0 | 0.027 | S | 88.6 | 8.4 | NA | NA | NA | |||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ARG | A:291 | A:291 | 97.0 | 0.431 | S | -141.3 | 29.6 | 97.0 | 0.431 | 0.0 |
SO4 SO4 HOH |
7.039 3.074 3.526 |
CB NH1 N |
O1 O1 O |
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| ARG | B:291 | B:291 | 48.0 | NA | S | -141.6 | 26.4 | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | GLY | A:314 | A:291 | 2.0 | 0.027 | S | 90.7 | 15.0 | 2.0 | 0.027 | 0.0 |
CA HOH |
4.954 2.813 |
N O |
CA O |
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| GLY | B:314 | B:291 | 2.0 | 0.027 | S | 90.4 | 6.8 | NA | NA | NA | |||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | GLY | A:314 | A:291 | 2.0 | 0.027 | S | 87.9 | 12.4 | 2.0 | 0.027 | 0.0 |
CA HOH |
4.767 2.865 |
N O |
CA O |
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| GLY | B:314 | B:291 | 1.0 | 0.013 | S | 81.6 | 17.6 | NA | NA | NA | |||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | GLY | A:314 | A:291 | 2.0 | 0.027 | S | 81.9 | 15.0 | 2.0 | 0.027 | 0.0 |
MG HOH |
5.082 2.723 |
N O |
MG O |
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| GLY | B:314 | B:291 | 2.0 | 0.027 | S | 92.7 | 17.0 | NA | NA | NA | |||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | GLY | A:314 | A:291 | 2.0 | 0.027 | S | 85.0 | 13.8 | 2.0 | 0.027 | 0.0 |
MG HOH |
4.927 2.767 |
N O |
MG O |
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| GLY | B:314 | B:291 | 2.0 | 0.027 | S | 85.0 | 16.2 | NA | NA | NA | |||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | GLY | A:290 | A:290 | 2.0 | 0.027 | S | 86.8 | 10.5 | 2.0 | 0.027 | 0.0 |
G16 CD HOH |
7.300 5.029 3.075 |
C N O |
O2P CD O |
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| GLY | B:290 | B:290 | 0.0 | 0.0 | S | 72.9 | 20.2 | 0.0 | 0.0 | 0.0 |
CD HOH |
5.378 4.379 |
N O |
CD O |
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| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | GLY | A:290 | A:290 | 1.0 | 0.013 | S | 69.9 | 9.9 | 1.0 | 0.013 | 0.0 |
CO VG1 HOH |
5.219 7.095 2.528 |
N N O |
CO OV1 O |
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| GLY | B:290 | B:290 | 1.0 | 0.013 | S | 95.8 | 16.9 | 1.0 | 0.013 | 0.0 |
HOH |
4.723 |
O |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | GLY | A:290 | A:290 | 3.0 | 0.04 | S | 66.2 | 21.7 | 3.0 | 0.04 | 0.0 |
CD HOH |
5.231 2.974 |
N O |
CD O |
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| GLY | B:290 | B:290 | 1.0 | 0.013 | S | 76.2 | -1.4 | NA | NA | NA | |||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | GLY | A:290 | A:290 | 1.0 | 0.013 | S | 62.0 | 47.5 | 1.0 | 0.013 | 0.0 |
CD SO4 HOH |
5.048 7.230 2.734 |
N N O |
CD O2 O |
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| GLY | B:290 | B:290 | 1.0 | 0.013 | S | 85.0 | -5.1 | NA | NA | NA | |||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | GLY | A:290 | A:290 | 2.0 | 0.027 | S | 81.8 | 11.4 | 2.0 | 0.027 | 0.0 |
NI HOH |
4.896 2.873 |
N O |
NI O |
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| GLY | B:290 | B:290 | 2.0 | 0.027 | S | 85.5 | -4.6 | NA | NA | NA | |||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | GLY | A:290 | A:290 | 2.0 | 0.027 | S | 74.5 | -6.7 | NA | NA | NA | ||||||
| GLY | B:290 | B:290 | 2.0 | 0.027 | S | 74.1 | -1.1 | 2.0 | 0.027 | 0.0 |
MG HOH |
5.316 2.048 |
H O |
MG H1 |
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| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | GLY | A:312 | A:309 | 3.0 | 0.04 | S | 93.1 | 13.3 | 3.0 | 0.04 | 0.0 |
ZN HOH |
4.559 7.314 |
N C |
ZN O |
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| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | GLY | A:312 | A:309 | 3.0 | 0.04 | S | 88.0 | 23.7 | 3.0 | 0.04 | 0.0 |
MG HOH |
5.113 9.280 |
N N |
MG O |
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| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | GLY | A:312 | A:309 | 2.0 | 0.027 | S | 90.1 | 16.4 | 2.0 | 0.027 | 0.0 |
ZN HOH |
4.801 3.067 |
N O |
ZN O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | GLY | A:291 | A:291 | 2.0 | 0.027 | S | 78.6 | 15.6 | |