Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 64101908 . C A CCDS625.1:NM_002633.2:c.877Cga>Aga_NP_002624.2:p.293R>R Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5epc 1 P36871 100.0 0.0 X-RAY
 2016-04-27 ARG A:316 A:293 42.0 0.187 B -119.7 152.0 42.0 0.187 0.0 MG
SO4
SO4
GOL
HOH
 4.042
7.754
3.236
4.255
2.827
 CD
NH1
NH1
NH1
CD
 MG
O2
O4
O3
O
ARG B:316 B:293 48.0 0.213 B -115.5 158.3 NA NA NA
6uiq 1 P36871 100.0 0.0 X-RAY
 2020-08-12 ARG A:316 B:293 46.0 0.204 B -121.6 153.1 46.0 0.204 0.0 G6P
MG
HOH
 3.337
4.083
3.022
 NH1
CD
CD
 O1
MG
O
ARG B:316 A:293 39.0 0.173 B -116.3 156.0 NA NA NA
5vin 1 P36871 99.82 0.0 X-RAY
 2018-06-27 ARG A:316 A:293 36.0 0.16 B -120.8 151.8 36.0 0.16 0.0 SO4
SO4
CO
HOH
 7.851
3.301
4.004
3.455
 NH1
NH2
CD
CA
 O2
O2
CO
O
ARG B:316 B:293 11.0 NA B -116.2 155.6 NA NA NA
6uo6 1 P36871 99.82 0.0 X-RAY
 2020-03-04 ARG A:316 A:293 50.0 0.222 B -115.8 153.0 50.0 0.222 0.0 MG
SO4
SO4
HOH
 4.374
7.593
6.081
3.107
 CD
NH1
NH1
CD
 MG
O2
O2
O
ARG B:316 B:293 42.0 0.187 B -120.0 153.6 NA NA NA
5vg7 1 P36871 99.82 0.0 X-RAY
 2018-06-20 ARG A:295 A:293 34.0 0.151 B -121.3 155.9 34.0 0.151 0.0 MG
SO4
HOH
 4.034
8.105
3.062
 CG
NH1
CG
 MG
O2
O
5vg7 2 P36871 99.82 0.0 X-RAY
 2018-06-20 ARG B:295 B:293 46.0 0.204 B -119.4 155.3 NA NA NA
5f9c 1 P36871 99.82 0.0 X-RAY
 2016-04-27 ARG A:293 A:293 73.0 0.324 B -124.6 155.9 73.0 0.324 0.0 MG
SO4
SO4
HOH
 3.939
6.870
4.658
3.410
 NE
NH2
NH2
CA
 MG
O1
O4
O
ARG B:293 B:293 91.0 0.404 B -124.5 154.4 NA NA NA
5hsh 1 P36871 99.82 0.0 X-RAY
 2016-04-27 ARG A:293 A:293 61.0 0.271 -98.8 169.3 61.0 0.271 0.0 SO4
SO4
HOH
 2.818
5.421
2.892
 NH1
NH2
O
 O1
O1
O
ARG B:293 B:293 17.0 NA -100.0 169.3 NA NA NA
5tr2 1 P36871 99.82 0.0 X-RAY
 2017-02-08 ARG A:316 A:293 36.0 0.16 B -120.1 164.1 36.0 0.16 0.0 SO4
CA
GOL
HOH
 7.286
3.920
3.971
3.360
 NH2
CG
NH2
CD
 O2
CA
C1
O
ARG B:316 B:293 37.0 0.164 B -112.7 164.8 NA NA NA
5jn5 1 P36871 99.82 0.0 X-RAY
 2017-02-08 ARG A:316 A:293 28.0 0.124 B -119.2 153.8 28.0 0.124 0.0 SO4
CA
HOH
 7.135
4.469
2.973
 NH2
NE
NH2
 O2
CA
O
ARG B:316 B:293 28.0 0.124 B -118.2 157.2 NA NA NA
5vec 1 P36871 99.82 0.0 X-RAY
 2018-06-27 ARG A:316 A:293 38.0 0.169 -117.6 158.1 38.0 0.169 0.0 SO4
SO4
MG
HOH
 7.992
9.527
4.309
3.180
 NH1
NH1
CG
NH2
 O2
O2
MG
O
ARG B:316 B:293 35.0 0.156 B -129.0 152.8 NA NA NA
5vbi 1 P36871 99.82 0.0 X-RAY
 2018-06-20 ARG A:316 A:293 19.0 0.084 B -129.0 159.3 19.0 0.084 0.0 MG
GOL
GOL
GOL
HOH
 4.275
7.174
8.465
7.403
2.756
 NE
CD
NH1
NH1
NH1
 MG
O1
O3
O2
O
ARG B:316 B:293 28.0 0.124 B -119.5 158.9 NA NA NA
1c47 1 P00949 96.97 0.0 X-RAY
 1999-08-13 ARG A:292 A:292 31.0 0.138 B -117.4 167.6 31.0 0.138 0.0 G16
CD
HOH
 3.112
4.269
3.370
 NE
NE
CA
 O2P
CD
O
ARG B:292 B:292 18.0 0.08 -138.1 159.1 18.0 0.08 0.0 CD
HOH
 4.457
2.906
 NE
NH1
 CD
O
1c4g 1 P00949 96.97 0.0 X-RAY
 1999-08-27 ARG A:292 A:292 15.0 0.067 -114.9 150.8 15.0 0.067 0.0 CO
VG1
HOH
 4.028
3.185
3.222
 CG
NE
CA
 CO
OV1
O
ARG B:292 B:292 13.0 0.058 -115.3 176.3 13.0 0.058 0.0 HOH
 3.257
 CD
 O
1jdy 1 P00949 96.97 0.0 X-RAY
 1997-03-12 ARG A:292 A:292 20.0 0.089 B -127.4 147.7 20.0 0.089 0.0 CD
SO4
HOH
 4.333
9.243
2.679
 CG
NE
NH1
 CD
O2
O
ARG B:292 B:292 23.0 0.102 -127.9 150.1 NA NA NA
1lxt 1 P00949 96.97 0.0 X-RAY
 1997-02-12 ARG A:292 A:292 40.0 0.178 -133.0 154.0 40.0 0.178 0.0 CD
SO4
HOH
 4.318
2.896
2.290
 CG
NE
NH1
 CD
O1
O
ARG B:292 B:292 49.0 0.218 B -115.3 145.2 NA NA NA
1vkl 1 P00949 96.97 0.0 X-RAY
 1997-01-11 ARG A:292 A:292 17.0 0.076 B -128.7 151.7 17.0 0.076 0.0 NI
HOH
 4.351
2.632
 NE
NH1
 NI
O
ARG B:292 B:292 22.0 0.098 B -121.0 158.0 NA NA NA
3pmg 1 P00949 96.97 0.0 X-RAY
 1995-12-07 ARG A:292 A:292 18.0 0.08 -134.7 154.6 NA NA NA
ARG B:292 B:292 20.0 0.089 B -127.6 154.2 20.0 0.089 0.0 MG
HOH
 3.496
1.771
 HE
HH12
 MG
O
6sno 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ARG A:314 A:311 29.0 0.129 B -115.8 159.2 29.0 0.129 0.0 ZN
G1P
HOH
 3.812
3.579
4.362
 CD
NH2
NH1
 ZN
O6
O
6snp 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ARG A:314 A:311 38.0 0.169 B -107.3 159.4 38.0 0.169 0.0 MG
HOH
 3.644
7.536
 CG
NH2
 MG
O
6snq 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ARG A:314 A:311 28.0 0.124 B -126.2 157.1 28.0 0.124 0.0 ZN
G6P
HOH
 3.868
3.610
2.799
 CD
NH2
NH1
 ZN
O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p36871-f1 1 P36871 100.0 0.0 ARG A:293 A:293 19.0 0.084 -123.4 155.0