Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64102034 | . | A | C | CCDS625.1:NM_002633.2:c.1003Atg>Ctg_NP_002624.2:p.335M>L | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | MET | A:358 | A:335 | 1.0 | 0.005 | T | -54.4 | -40.3 | 1.0 | 0.005 | 0.0 |
SO4 GOL HOH |
7.150 8.568 3.886 |
CG C CE |
O1 O1 O |
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| MET | B:358 | B:335 | 1.0 | 0.005 | T | -53.5 | -42.2 | NA | NA | NA | |||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | MET | A:358 | B:335 | 1.0 | 0.005 | T | -51.0 | -44.0 | 1.0 | 0.005 | 0.0 |
G6P HOH |
9.476 4.016 |
N CE |
O4 O |
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| MET | B:358 | A:335 | 1.0 | 0.005 | T | -52.0 | -42.0 | NA | NA | NA | |||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | MET | A:358 | A:335 | 1.0 | 0.005 | T | -54.9 | -41.1 | 1.0 | 0.005 | 0.0 |
HOH |
7.383 |
O |
O |
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| MET | B:358 | B:335 | 1.0 | 0.005 | T | -54.5 | -43.1 | NA | NA | NA | |||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | MET | A:358 | A:335 | 1.0 | 0.005 | T | -56.5 | -41.2 | 1.0 | 0.005 | 0.0 |
SO4 HOH |
7.012 4.135 |
CG CG |
O1 O |
||
| MET | B:358 | B:335 | 1.0 | 0.005 | T | -53.3 | -44.1 | NA | NA | NA | |||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | MET | A:337 | A:335 | 0.0 | 0.0 | T | -56.0 | -40.9 | 0.0 | 0.0 | 0.0 |
SO4 HOH |
7.256 3.892 |
CG CE |
O2 O |
||
| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | MET | B:337 | B:335 | 1.0 | 0.005 | T | -51.0 | -46.3 | NA | NA | NA | ||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | MET | A:335 | A:335 | 1.0 | 0.005 | T | -50.8 | -43.4 | 1.0 | 0.005 | 0.0 |
SO4 HOH |
9.880 5.805 |
CE N |
O4 O |
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| MET | B:335 | B:335 | 1.0 | 0.005 | T | -52.6 | -44.3 | NA | NA | NA | |||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | MET | A:335 | A:335 | 2.0 | 0.011 | T | -52.4 | -43.4 | 2.0 | 0.011 | 0.0 |
HOH |
6.039 |
N |
O |
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| MET | B:335 | B:335 | 2.0 | 0.011 | T | -53.5 | -45.5 | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | MET | A:358 | A:335 | 1.0 | 0.005 | T | -51.9 | -43.3 | 1.0 | 0.005 | 0.0 |
SO4 HOH |
9.860 6.500 |
CE CE |
O4 O |
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| MET | B:358 | B:335 | 0.0 | 0.0 | T | -62.9 | -24.8 | NA | NA | NA | |||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | MET | A:358 | A:335 | 1.0 | 0.005 | T | -56.4 | -40.5 | 1.0 | 0.005 | 0.0 |
HOH |
3.842 |
CE |
O |
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| MET | B:358 | B:335 | 1.0 | 0.005 | T | -52.0 | -43.6 | NA | NA | NA | |||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | MET | A:358 | A:335 | 1.0 | 0.005 | T | -50.3 | -47.8 | 1.0 | 0.005 | 0.0 |
SO4 SO4 HOH |
9.672 7.525 3.847 |
CE CG CE |
O3 O4 O |
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| MET | B:358 | B:335 | 1.0 | 0.005 | T | -49.5 | -43.4 | NA | NA | NA | |||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | MET | A:358 | A:335 | 1.0 | 0.005 | T | -57.2 | -38.7 | 1.0 | 0.005 | 0.0 |
SO4 GOL GOL GOL HOH |
6.918 9.958 7.620 8.607 3.659 |
CG N CE C CE |
O2 O1 O1 O1 O |
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| MET | B:358 | B:335 | 1.0 | 0.005 | T | -53.2 | -42.0 | NA | NA | NA | |||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | MET | A:334 | A:334 | 1.0 | 0.005 | T | -44.9 | -49.6 | 1.0 | 0.005 | 0.0 |
G16 HOH |
9.368 5.753 |
N N |
O2 O |
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| MET | B:334 | B:334 | 1.0 | 0.005 | T | -51.5 | -46.1 | 1.0 | 0.005 | 0.0 |
HOH |
5.611 |
O |
O |
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| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | MET | A:334 | A:334 | 6.0 | 0.032 | T | -47.5 | -45.0 | 6.0 | 0.032 | 0.0 |
VG1 HOH |
9.337 4.776 |
N O |
O3 O |
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| MET | B:334 | B:334 | 1.0 | 0.005 | T | -59.0 | -44.0 | 1.0 | 0.005 | 0.0 |
HOH |
5.106 |
CE |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | MET | A:334 | A:334 | 1.0 | 0.005 | T | -56.4 | -39.8 | 1.0 | 0.005 | 0.0 |
SO4 HOH |
9.104 4.759 |
CE CG |
O3 O |
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| MET | B:334 | B:334 | 2.0 | 0.011 | T | -50.0 | -37.4 | NA | NA | NA | |||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | MET | A:334 | A:334 | 1.0 | 0.005 | T | -44.8 | -39.8 | 1.0 | 0.005 | 0.0 |
HOH |
4.535 |
CG |
O |
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| MET | B:334 | B:334 | 2.0 | 0.011 | T | -46.6 | -44.8 | NA | NA | NA | |||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | MET | A:334 | A:334 | 1.0 | 0.005 | T | -53.5 | -39.7 | 1.0 | 0.005 | 0.0 |
HOH |
3.927 |
CG |
O |
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| MET | B:334 | B:334 | 2.0 | 0.011 | T | -48.0 | -41.9 | NA | NA | NA | |||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | MET | A:334 | A:334 | 1.0 | 0.005 | T | -54.4 | -38.3 | NA | NA | NA | ||||||
| MET | B:334 | B:334 | 2.0 | 0.011 | T | -51.3 | -45.5 | 2.0 | 0.011 | 0.0 |
HOH |
3.312 |
CE |
H1 |
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| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | MET | A:356 | A:353 | 0.0 | 0.0 | T | -55.2 | -42.6 | 0.0 | 0.0 | 0.0 |
G1P HOH |
8.656 3.387 |
N CE |
O3 O |
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| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | MET | A:356 | A:353 | 0.0 | 0.0 | T | -54.6 | -47.6 | 0.0 | 0.0 | 0.0 | ||||||
| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | MET | A:356 | A:353 | 0.0 | 0.0 | T | -57.3 | -47.6 | 0.0 | 0.0 | 0.0 |
G6P HOH |
8.666 4.060 |
N CG |
O4 O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | MET | A:335 | A:335 | 1.0 | 0.005 | T | -53.6 | -41.5 | |