Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64104430 | . | C | A | CCDS625.1:NM_002633.2:c.1103gCg>gAg_NP_002624.2:p.368A>E | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | ALA | A:391 | A:368 | 48.0 | 0.417 | T | -90.4 | 4.9 | 48.0 | 0.417 | 0.0 |
GOL HOH |
7.408 3.359 |
N C |
O1 O |
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ALA | B:391 | B:368 | 43.0 | 0.374 | T | -89.6 | 10.8 | NA | NA | NA | |||||||||||||
6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | ALA | A:391 | B:368 | 45.0 | 0.391 | T | -97.2 | 7.7 | 45.0 | 0.391 | 0.0 |
HOH |
4.974 |
C |
O |
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ALA | B:391 | A:368 | 42.0 | 0.365 | T | -89.2 | 6.7 | NA | NA | NA | |||||||||||||
5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ALA | A:391 | A:368 | 54.0 | 0.47 | T | -91.4 | 4.2 | 54.0 | 0.47 | 0.0 |
GOL HOH |
6.160 8.709 |
O N |
O3 O |
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ALA | B:391 | B:368 | 60.0 | 0.522 | T | -89.0 | 11.1 | NA | NA | NA | |||||||||||||
6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | ALA | A:391 | A:368 | 46.0 | 0.4 | T | -91.4 | 4.9 | 46.0 | 0.4 | 0.0 |
HOH |
3.229 |
C |
O |
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ALA | B:391 | B:368 | 46.0 | 0.4 | T | -75.4 | 4.4 | NA | NA | NA | |||||||||||||
5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ALA | A:370 | A:368 | 41.0 | 0.357 | T | -84.4 | 7.1 | 41.0 | 0.357 | 0.0 |
GOL HOH |
6.487 3.629 |
O C |
O1 O |
||
5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ALA | B:370 | B:368 | 41.0 | 0.357 | T | -85.9 | 4.1 | NA | NA | NA | ||||||
5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ALA | A:368 | A:368 | 46.0 | 0.4 | T | -98.8 | 11.2 | 46.0 | 0.4 | 0.0 |
HOH |
4.819 |
C |
O |
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ALA | B:368 | B:368 | 42.0 | 0.365 | T | -96.0 | 12.0 | NA | NA | NA | |||||||||||||
5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ALA | A:368 | A:368 | 67.0 | 0.583 | T | -85.0 | 8.7 | 67.0 | 0.583 | 0.0 |
HOH |
6.998 |
N |
O |
||
ALA | B:368 | B:368 | 65.0 | 0.565 | T | -83.3 | 11.6 | NA | NA | NA | |||||||||||||
5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ALA | A:391 | A:368 | 56.0 | 0.487 | T | -89.1 | 10.5 | 56.0 | 0.487 | 0.0 |
HOH |
4.887 |
C |
O |
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ALA | B:391 | B:368 | 73.0 | 0.635 | T | -116.5 | 11.4 | NA | NA | NA | |||||||||||||
5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ALA | A:391 | A:368 | 38.0 | 0.33 | T | -94.1 | 6.2 | 38.0 | 0.33 | 0.0 |
HOH |
2.609 |
O |
O |
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ALA | B:391 | B:368 | 52.0 | 0.452 | T | -91.2 | 9.1 | NA | NA | NA | |||||||||||||
5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ALA | A:391 | A:368 | 45.0 | 0.391 | T | -82.9 | 2.4 | 45.0 | 0.391 | 0.0 |
HOH |
4.960 |
O |
O |
||
ALA | B:391 | B:368 | 40.0 | 0.348 | T | -83.4 | 2.7 | NA | NA | NA | |||||||||||||
5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ALA | A:391 | A:368 | 44.0 | 0.383 | T | -88.8 | 7.9 | 44.0 | 0.383 | 0.0 |
HOH |
3.319 |
C |
O |
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ALA | B:391 | B:368 | 44.0 | 0.383 | T | -82.2 | 6.0 | NA | NA | NA | |||||||||||||
1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | ALA | A:367 | A:367 | 37.0 | 0.322 | T | -84.9 | 20.6 | 37.0 | 0.322 | 0.0 |
HOH |
9.403 |
O |
O |
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ALA | B:367 | B:367 | 45.0 | 0.391 | T | -88.5 | 11.7 | 45.0 | 0.391 | 0.0 |
HOH |
5.232 |
C |
O |
|||||||||
1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | ALA | A:367 | A:367 | 43.0 | 0.374 | T | -79.5 | 22.9 | 43.0 | 0.374 | 0.0 |
HOH |
8.174 |
N |
O |
||
ALA | B:367 | B:367 | 43.0 | 0.374 | T | -89.2 | 15.8 | 43.0 | 0.374 | 0.0 |
HOH |
5.195 |
C |
O |
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1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | ALA | A:367 | A:367 | 42.0 | 0.365 | T | -85.1 | 5.7 | 42.0 | 0.365 | 0.0 |
HOH |
5.299 |
O |
O |
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ALA | B:367 | B:367 | 44.0 | 0.383 | T | -89.6 | 10.6 | NA | NA | NA | |||||||||||||
1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | ALA | A:367 | A:367 | 39.0 | 0.339 | T | -79.2 | 5.1 | 39.0 | 0.339 | 0.0 |
HOH |
4.779 |
O |
O |
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ALA | B:367 | B:367 | 51.0 | 0.443 | T | -83.0 | 10.5 | NA | NA | NA | |||||||||||||
1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | ALA | A:367 | A:367 | 43.0 | 0.374 | T | -85.2 | 2.0 | 43.0 | 0.374 | 0.0 |
HOH |
5.436 |
C |
O |
||
ALA | B:367 | B:367 | 44.0 | 0.383 | T | -91.4 | 10.1 | NA | NA | NA | |||||||||||||
3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | ALA | A:367 | A:367 | 37.0 | 0.322 | T | -86.1 | -0.1 | NA | NA | NA | ||||||
ALA | B:367 | B:367 | 44.0 | 0.383 | T | -87.2 | 5.9 | 44.0 | 0.383 | 0.0 |
HOH |
3.358 |
C |
H2 |
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6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ALA | A:389 | A:386 | 37.0 | 0.322 | T | -99.8 | 10.5 | 37.0 | 0.322 | 0.0 |
HOH |
7.073 |
O |
O |
||
6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ALA | A:389 | A:386 | 41.0 | 0.357 | T | -96.9 | 11.5 | 41.0 | 0.357 | 0.0 |
HOH |
9.723 |
N |
O |
||
6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ALA | A:389 | A:386 | 43.0 | 0.374 | T | -92.4 | 11.9 | 43.0 | 0.374 | 0.0 |
HOH |
5.484 |
C |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | ALA | A:368 | A:368 | 40.0 | 0.348 | T | -77.5 | 6.4 |