Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 64114247 . C A CCDS625.1:NM_002633.2:c.1204Cta>Ata_NP_002624.2:p.402L>I Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5epc 1 P36871 100.0 0.0 X-RAY
 2016-04-27 LEU A:425 A:402 6.0 0.035 H -61.5 -38.4 6.0 0.035 0.0 HOH
 2.852
 O
 O
LEU B:425 B:402 9.0 0.053 H -61.1 -36.3 NA NA NA
6uiq 1 P36871 100.0 0.0 X-RAY
 2020-08-12 LEU A:425 B:402 5.0 0.029 H -61.9 -39.6 5.0 0.029 0.0 HOH
 5.154
 CD2
 O
LEU B:425 A:402 7.0 0.041 H -58.6 -44.0 NA NA NA
5vin 1 P36871 99.82 0.0 X-RAY
 2018-06-27 LEU A:425 A:402 6.0 0.035 H -61.8 -37.9 6.0 0.035 0.0 HOH
 7.135
 C
 O
LEU B:425 B:402 14.0 0.082 H -61.6 -33.3 NA NA NA
6uo6 1 P36871 99.82 0.0 X-RAY
 2020-03-04 LEU A:425 A:402 5.0 0.029 H -60.0 -37.6 5.0 0.029 0.0 HOH
 2.617
 O
 O
LEU B:425 B:402 4.0 0.024 H -61.2 -37.1 NA NA NA
5vg7 1 P36871 99.82 0.0 X-RAY
 2018-06-20 LEU A:404 A:402 7.0 0.041 H -59.1 -37.8 7.0 0.041 0.0 HOH
 2.870
 O
 O
5vg7 2 P36871 99.82 0.0 X-RAY
 2018-06-20 LEU B:404 B:402 6.0 0.035 H -57.2 -39.9 NA NA NA
5f9c 1 P36871 99.82 0.0 X-RAY
 2016-04-27 LEU A:402 A:402 7.0 0.041 H -59.4 -39.6 7.0 0.041 0.0 HOH
 7.690
 N
 O
LEU B:402 B:402 5.0 0.029 H -59.0 -40.6 NA NA NA
5hsh 1 P36871 99.82 0.0 X-RAY
 2016-04-27 LEU A:402 A:402 7.0 0.041 H -60.9 -30.1 7.0 0.041 0.0 SO4
HOH
 9.569
5.452
 N
CD2
 O2
O
LEU B:402 B:402 7.0 0.041 H -60.4 -34.0 NA NA NA
5tr2 1 P36871 99.82 0.0 X-RAY
 2017-02-08 LEU A:425 A:402 11.0 0.065 H -53.1 -43.5 11.0 0.065 0.0 HOH
 5.373
 CD2
 O
LEU B:425 B:402 28.0 NA H -65.9 -5.5 NA NA NA
5jn5 1 P36871 99.82 0.0 X-RAY
 2017-02-08 LEU A:425 A:402 6.0 0.035 H -61.7 -38.6 6.0 0.035 0.0 HOH
 2.950
 O
 O
LEU B:425 B:402 8.0 0.047 H -64.2 -36.8 NA NA NA
5vec 1 P36871 99.82 0.0 X-RAY
 2018-06-27 LEU A:425 A:402 5.0 0.029 H -59.7 -40.0 5.0 0.029 0.0 HOH
 2.738
 O
 O
LEU B:425 B:402 5.0 0.029 H -60.7 -36.0 NA NA NA
5vbi 1 P36871 99.82 0.0 X-RAY
 2018-06-20 LEU A:425 A:402 7.0 0.041 H -63.4 -35.9 7.0 0.041 0.0 HOH
 2.859
 O
 O
LEU B:425 B:402 6.0 0.035 H -62.4 -36.9 NA NA NA
1c47 1 P00949 96.97 0.0 X-RAY
 1999-08-13 LEU A:401 A:401 6.0 0.035 H -60.8 -45.7 6.0 0.035 0.0 HOH
 5.328
 CD2
 O
LEU B:401 B:401 6.0 0.035 H -60.9 -44.0 6.0 0.035 0.0 HOH
 5.284
 CD2
 O
1c4g 1 P00949 96.97 0.0 X-RAY
 1999-08-27 LEU A:401 A:401 9.0 0.053 H -60.7 -44.4 9.0 0.053 0.0 HOH
 5.465
 CD2
 O
LEU B:401 B:401 5.0 0.029 H -61.7 -46.0 5.0 0.029 0.0 HOH
 5.328
 CD2
 O
1jdy 1 P00949 96.97 0.0 X-RAY
 1997-03-12 LEU A:401 A:401 6.0 0.035 H -65.1 -41.6 6.0 0.035 0.0 HOH
 3.398
 O
 O
LEU B:401 B:401 8.0 0.047 H -60.6 -47.5 NA NA NA
1lxt 1 P00949 96.97 0.0 X-RAY
 1997-02-12 LEU A:401 A:401 7.0 0.041 H -55.9 -44.8 7.0 0.041 0.0 HOH
 3.366
 CD2
 O
LEU B:401 B:401 10.0 0.059 H -65.6 -37.0 NA NA NA
1vkl 1 P00949 96.97 0.0 X-RAY
 1997-01-11 LEU A:401 A:401 5.0 0.029 H -63.5 -39.6 5.0 0.029 0.0 HOH
 3.443
 O
 O
LEU B:401 B:401 8.0 0.047 H -68.6 -40.5 NA NA NA
3pmg 1 P00949 96.97 0.0 X-RAY
 1995-12-07 LEU A:401 A:401 6.0 0.035 H -60.1 -49.6 NA NA NA
LEU B:401 B:401 8.0 0.047 H -66.0 -41.3 8.0 0.047 0.0 HOH
 2.526
 O
 H1
6sno 1 P36871 93.05 0.0 X-RAY
 2020-04-08 LEU A:423 A:420 8.0 0.047 H -62.4 -50.3 8.0 0.047 0.0
6snp 1 P36871 93.05 0.0 X-RAY
 2020-04-08 LEU A:423 A:420 6.0 0.035 H -65.3 -39.2 6.0 0.035 0.0 HOH
 7.167
 O
 O
6snq 1 P36871 93.05 0.0 X-RAY
 2020-04-08 LEU A:423 A:420 8.0 0.047 H -62.7 -40.3 8.0 0.047 0.0 HOH
 7.150
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p36871-f1 1 P36871 100.0 0.0 LEU A:402 A:402 6.0 0.035 H -60.2 -44.3