Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 64114256 . C A CCDS625.1:NM_002633.2:c.1213Cgc>Agc_NP_002624.2:p.405R>S Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5epc 1 P36871 100.0 0.0 X-RAY
 2016-04-27 ARG A:428 A:405 72.0 0.32 H -75.1 -32.3 72.0 0.32 0.0 HOH
 2.737
 O
 O
ARG B:428 B:405 73.0 0.324 H -67.3 -29.4 NA NA NA
6uiq 1 P36871 100.0 0.0 X-RAY
 2020-08-12 ARG A:428 B:405 66.0 0.293 H -80.5 -33.1 66.0 0.293 0.0 HOH
 2.836
 NH2
 O
ARG B:428 A:405 68.0 0.302 H -83.0 -35.1 NA NA NA
5vin 1 P36871 99.82 0.0 X-RAY
 2018-06-27 ARG A:428 A:405 72.0 0.32 H -75.3 -31.9 72.0 0.32 0.0 HOH
 3.897
 NH1
 O
ARG B:428 B:405 91.0 0.404 H -69.3 -29.8 NA NA NA
6uo6 1 P36871 99.82 0.0 X-RAY
 2020-03-04 ARG A:428 A:405 69.0 0.307 H -79.4 -31.6 69.0 0.307 0.0 HOH
 2.945
 O
 O
ARG B:428 B:405 75.0 0.333 H -70.7 -36.0 NA NA NA
5vg7 1 P36871 99.82 0.0 X-RAY
 2018-06-20 ARG A:407 A:405 68.0 0.302 H -82.2 -29.5 68.0 0.302 0.0 HOH
 2.733
 O
 O
5vg7 2 P36871 99.82 0.0 X-RAY
 2018-06-20 ARG B:407 B:405 69.0 0.307 H -70.1 -31.2 NA NA NA
5f9c 1 P36871 99.82 0.0 X-RAY
 2016-04-27 ARG A:405 A:405 78.0 0.347 H -70.4 -33.8 78.0 0.347 0.0 HOH
 3.044
 O
 O
ARG B:405 B:405 68.0 0.302 H -70.6 -36.7 NA NA NA
5hsh 1 P36871 99.82 0.0 X-RAY
 2016-04-27 ARG A:405 A:405 73.0 0.324 H -83.0 -28.0 73.0 0.324 0.0 SO4
HOH
 6.556
2.789
 CD
NH1
 O2
O
ARG B:405 B:405 68.0 0.302 H -86.0 -28.4 NA NA NA
5tr2 1 P36871 99.82 0.0 X-RAY
 2017-02-08 ARG A:428 A:405 70.0 0.311 H -79.8 -28.9 70.0 0.311 0.0 HOH
 2.879
 NH1
 O
ARG B:428 B:405 74.0 0.329 S -79.5 -33.3 NA NA NA
5jn5 1 P36871 99.82 0.0 X-RAY
 2017-02-08 ARG A:428 A:405 71.0 0.316 H -79.0 -27.4 71.0 0.316 0.0 HOH
 2.833
 O
 O
ARG B:428 B:405 73.0 0.324 H -78.0 -24.8 NA NA NA
5vec 1 P36871 99.82 0.0 X-RAY
 2018-06-27 ARG A:428 A:405 67.0 0.298 H -78.3 -35.4 67.0 0.298 0.0 HOH
 2.882
 NH1
 O
ARG B:428 B:405 74.0 0.329 H -71.5 -25.5 NA NA NA
5vbi 1 P36871 99.82 0.0 X-RAY
 2018-06-20 ARG A:428 A:405 71.0 0.316 H -77.7 -28.5 71.0 0.316 0.0 HOH
 2.873
 O
 O
ARG B:428 B:405 71.0 0.316 H -76.7 -27.9 NA NA NA
1c47 1 P00949 96.97 0.0 X-RAY
 1999-08-13 ARG A:404 A:404 56.0 0.249 H -74.9 -39.2 56.0 0.249 0.0 HOH
 3.242
 NH2
 O
ARG B:404 B:404 68.0 0.302 H -90.5 -16.3 68.0 0.302 0.0 HOH
 7.890
 N
 O
1c4g 1 P00949 96.97 0.0 X-RAY
 1999-08-27 ARG A:404 A:404 46.0 0.204 H -69.9 -44.5 46.0 0.204 0.0 HOH
 3.367
 NH2
 O
ARG B:404 B:404 67.0 0.298 H -84.3 -16.6 67.0 0.298 0.0 HOH
 7.918
 N
 O
1jdy 1 P00949 96.97 0.0 X-RAY
 1997-03-12 ARG A:404 A:404 64.0 0.284 H -61.8 -44.0 64.0 0.284 0.0 HOH
 2.468
 NH2
 O
ARG B:404 B:404 63.0 0.28 H -76.7 -25.2 NA NA NA
1lxt 1 P00949 96.97 0.0 X-RAY
 1997-02-12 ARG A:404 A:404 61.0 0.271 H -74.1 -27.4 61.0 0.271 0.0 HOH
 3.297
 CZ
 O
ARG B:404 B:404 64.0 0.284 H -73.2 -23.5 NA NA NA
1vkl 1 P00949 96.97 0.0 X-RAY
 1997-01-11 ARG A:404 A:404 60.0 0.267 H -60.0 -44.6 60.0 0.267 0.0 HOH
 2.573
 NH2
 O
ARG B:404 B:404 71.0 0.316 H -78.7 -13.4 NA NA NA
3pmg 1 P00949 96.97 0.0 X-RAY
 1995-12-07 ARG A:404 A:404 65.0 0.289 H -78.2 -28.4 NA NA NA
ARG B:404 B:404 62.0 0.276 H -74.2 -27.8 62.0 0.276 0.0 HOH
 1.560
 HH22
 H2
6sno 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ARG A:426 A:423 67.0 0.298 H -75.4 -18.2 67.0 0.298 0.0
6snp 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ARG A:426 A:423 60.0 0.267 H -78.3 -24.1 60.0 0.267 0.0 HOH
 2.570
 O
 O
6snq 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ARG A:426 A:423 68.0 0.302 H -84.3 -22.9 68.0 0.302 0.0 HOH
 2.664
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p36871-f1 1 P36871 100.0 0.0 ARG A:405 A:405 79.0 0.351 H -79.7 -27.4