Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 64114301 . T A CCDS625.1:NM_002633.2:c.1258Tat>Aat_NP_002624.2:p.420Y>N Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5epc 1 P36871 100.0 0.0 X-RAY
 2016-04-27 TYR A:443 A:420 20.0 0.087 H -107.0 -5.6 20.0 0.087 0.0 HOH
 2.334
 OH
 O
TYR B:443 B:420 33.0 0.143 H -109.6 -5.1 NA NA NA
6uiq 1 P36871 100.0 0.0 X-RAY
 2020-08-12 TYR A:443 B:420 23.0 0.1 H -103.8 -4.3 23.0 0.1 0.0 HOH
 2.294
 OH
 O
TYR B:443 A:420 21.0 0.091 H -103.5 -3.0 NA NA NA
5vin 1 P36871 99.82 0.0 X-RAY
 2018-06-27 TYR A:443 A:420 20.0 0.087 H -107.4 -5.7 20.0 0.087 0.0 HOH
 4.660
 CE2
 O
TYR B:443 B:420 70.0 0.304 H -110.0 -5.7 NA NA NA
6uo6 1 P36871 99.82 0.0 X-RAY
 2020-03-04 TYR A:443 A:420 19.0 0.083 H -113.7 0.4 19.0 0.083 0.0 HOH
 2.170
 OH
 O
TYR B:443 B:420 28.0 0.122 H -105.7 -2.5 NA NA NA
5vg7 1 P36871 99.82 0.0 X-RAY
 2018-06-20 TYR A:422 A:420 22.0 0.096 H -106.2 -3.0 22.0 0.096 0.0 GOL
HOH
 7.293
2.479
 O
OH
 O2
O
5vg7 2 P36871 99.82 0.0 X-RAY
 2018-06-20 TYR B:422 B:420 32.0 0.139 H -112.0 -7.1 NA NA NA
5f9c 1 P36871 99.82 0.0 X-RAY
 2016-04-27 TYR A:420 A:420 37.0 0.161 H -103.3 -8.8 37.0 0.161 0.0 HOH
 6.559
 CB
 O
TYR B:420 B:420 33.0 0.143 H -104.1 -9.4 NA NA NA
5hsh 1 P36871 99.82 0.0 X-RAY
 2016-04-27 TYR A:420 A:420 42.0 0.183 H -106.7 -6.8 42.0 0.183 0.0 SO4
HOH
 7.868
2.482
 OH
OH
 O3
O
TYR B:420 B:420 67.0 0.291 H -105.2 -8.3 NA NA NA
5tr2 1 P36871 99.82 0.0 X-RAY
 2017-02-08 TYR A:443 A:420 29.0 0.126 H -111.7 -4.3 29.0 0.126 0.0 HOH
 3.815
 CB
 O
TYR B:443 B:420 36.0 0.157 H -109.7 3.2 NA NA NA
5jn5 1 P36871 99.82 0.0 X-RAY
 2017-02-08 TYR A:443 A:420 21.0 0.091 H -106.2 -7.2 21.0 0.091 0.0 HOH
 2.389
 OH
 O
TYR B:443 B:420 36.0 0.157 H -110.7 -1.5 NA NA NA
5vec 1 P36871 99.82 0.0 X-RAY
 2018-06-27 TYR A:443 A:420 20.0 0.087 H -101.8 -3.2 20.0 0.087 0.0 HOH
 2.190
 OH
 O
TYR B:443 B:420 29.0 0.126 H -104.3 -5.9 NA NA NA
5vbi 1 P36871 99.82 0.0 X-RAY
 2018-06-20 TYR A:443 A:420 22.0 0.096 H -107.3 -4.3 22.0 0.096 0.0 GOL
HOH
 6.979
2.457
 O
OH
 O1
O
TYR B:443 B:420 29.0 0.126 H -106.0 -2.5 NA NA NA
1c47 1 P00949 96.97 0.0 X-RAY
 1999-08-13 PHE A:419 A:419 35.0 0.167 S -104.0 -3.5 35.0 0.167 0.0 HOH
 3.673
 CB
 O
PHE B:419 B:419 41.0 0.195 H -103.9 -19.5 41.0 0.195 0.0 HOH
 3.427
 CB
 O
1c4g 1 P00949 96.97 0.0 X-RAY
 1999-08-27 PHE A:419 A:419 52.0 0.248 H -130.5 -36.2 52.0 0.248 0.0 HOH
 3.909
 CB
 O
PHE B:419 B:419 26.0 0.124 H -124.7 -9.1 26.0 0.124 0.0 HOH
 3.124
 O
 O
1jdy 1 P00949 96.97 0.0 X-RAY
 1997-03-12 PHE A:419 A:419 33.0 0.157 H -100.0 3.1 33.0 0.157 0.0 HOH
 3.260
 CB
 O
PHE B:419 B:419 39.0 0.186 H -90.1 -27.9 NA NA NA
1lxt 1 P00949 96.97 0.0 X-RAY
 1997-02-12 PHE A:419 A:419 31.0 0.148 H -95.2 -26.3 31.0 0.148 0.0 HOH
 3.314
 CB
 O
PHE B:419 B:419 48.0 0.229 H -99.6 -9.4 NA NA NA
1vkl 1 P00949 96.97 0.0 X-RAY
 1997-01-11 PHE A:419 A:419 33.0 0.157 H -93.4 -3.6 33.0 0.157 0.0 HOH
 3.367
 CB
 O
PHE B:419 B:419 40.0 0.19 H -92.4 -8.3 NA NA NA
3pmg 1 P00949 96.97 0.0 X-RAY
 1995-12-07 PHE A:419 A:419 40.0 0.19 H -105.7 -6.6 NA NA NA
PHE B:419 B:419 39.0 0.186 H -103.0 -13.2 39.0 0.186 0.0 HOH
 3.464
 O
 H1
6sno 1 P36871 93.05 0.0 X-RAY
 2020-04-08 TYR A:441 A:438 24.0 0.104 H -116.6 -0.8 24.0 0.104 0.0 HOH
 6.770
 O
 O
6snp 1 P36871 93.05 0.0 X-RAY
 2020-04-08 TYR A:441 A:438 24.0 0.104 H -106.1 -13.1 24.0 0.104 0.0 HOH
 8.838
 O
 O
6snq 1 P36871 93.05 0.0 X-RAY
 2020-04-08 TYR A:441 A:438 31.0 0.135 H -107.3 -2.7 31.0 0.135 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p36871-f1 1 P36871 100.0 0.0 TYR A:420 A:420 25.0 0.109 H -109.8 -7.5