Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 64117371 . G A CCDS625.1:NM_002633.2:c.1312Gca>Aca_NP_002624.2:p.438A>T Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5epc 1 P36871 100.0 0.0 X-RAY
 2016-04-27 ALA A:461 A:438 0.0 0.0 H -61.6 -46.9 0.0 0.0 0.0 HOH
 5.219
 N
 O
ALA B:461 B:438 0.0 0.0 H -62.1 -24.9 NA NA NA
6uiq 1 P36871 100.0 0.0 X-RAY
 2020-08-12 ALA A:461 B:438 0.0 0.0 H -65.6 -47.1 0.0 0.0 0.0 HOH
 4.978
 N
 O
ALA B:461 A:438 0.0 0.0 H -66.8 -44.0 NA NA NA
5vin 1 P36871 99.82 0.0 X-RAY
 2018-06-27 ALA A:461 A:438 0.0 0.0 H -59.1 -45.0 0.0 0.0 0.0 SO4
HOH
 8.974
9.904
 N
O
 O3
O
ALA B:461 B:438 18.0 0.157 H -63.1 -24.8 NA NA NA
6uo6 1 P36871 99.82 0.0 X-RAY
 2020-03-04 ALA A:461 A:438 0.0 0.0 H -62.4 -41.7 0.0 0.0 0.0 HOH
 6.065
 N
 O
ALA B:461 B:438 0.0 0.0 H -68.0 -43.7 NA NA NA
5vg7 1 P36871 99.82 0.0 X-RAY
 2018-06-20 ALA A:440 A:438 0.0 0.0 H -65.0 -43.0 0.0 0.0 0.0 SO4
HOH
 8.086
3.337
 N
N
 O2
O
5vg7 2 P36871 99.82 0.0 X-RAY
 2018-06-20 ALA B:440 B:438 0.0 0.0 H -70.4 -42.5 NA NA NA
5f9c 1 P36871 99.82 0.0 X-RAY
 2016-04-27 ALA A:438 A:438 0.0 0.0 H -63.0 -43.0 0.0 0.0 0.0
ALA B:438 B:438 1.0 0.009 H -61.9 -41.3 NA NA NA
5hsh 1 P36871 99.82 0.0 X-RAY
 2016-04-27 ALA A:438 A:438 15.0 0.13 H -58.5 -42.8 15.0 0.13 0.0 HOH
 7.627
 O
 O
ALA B:438 B:438 18.0 0.157 H -57.6 -46.3 NA NA NA
5tr2 1 P36871 99.82 0.0 X-RAY
 2017-02-08 ALA A:461 A:438 0.0 0.0 H -49.1 -58.3 0.0 0.0 0.0 HOH
 9.664
 O
 O
ALA B:461 B:438 12.0 0.104 H -64.0 -43.4 NA NA NA
5jn5 1 P36871 99.82 0.0 X-RAY
 2017-02-08 ALA A:461 A:438 0.0 0.0 H -61.3 -46.0 0.0 0.0 0.0 HOH
 3.394
 N
 O
ALA B:461 B:438 0.0 0.0 H -71.6 -51.3 NA NA NA
5vec 1 P36871 99.82 0.0 X-RAY
 2018-06-27 ALA A:461 A:438 0.0 0.0 H -59.5 -43.6 0.0 0.0 0.0 GOL
HOH
 6.564
5.674
 N
N
 O3
O
ALA B:461 B:438 0.0 0.0 H -61.1 -38.0 NA NA NA
5vbi 1 P36871 99.82 0.0 X-RAY
 2018-06-20 ALA A:461 A:438 0.0 0.0 H -63.5 -43.1 0.0 0.0 0.0 GOL
HOH
 6.881
3.479
 O
N
 C3
O
ALA B:461 B:438 0.0 0.0 H -62.8 -44.3 NA NA NA
1c47 1 P00949 96.97 0.0 X-RAY
 1999-08-13 ALA A:437 A:437 2.0 0.017 H -65.9 -52.7 2.0 0.017 0.0 HOH
 7.973
 O
 O
ALA B:437 B:437 0.0 0.0 H -66.8 -43.4 0.0 0.0 0.0 HOH
 6.215
 O
 O
1c4g 1 P00949 96.97 0.0 X-RAY
 1999-08-27 ALA A:437 A:437 11.0 0.096 T -63.5 34.5 11.0 0.096 0.0 HOH
 8.586
 N
 O
ALA B:437 B:437 0.0 0.0 H -77.3 -40.1 0.0 0.0 0.0 HOH
 7.177
 N
 O
1jdy 1 P00949 96.97 0.0 X-RAY
 1997-03-12 ALA A:437 A:437 0.0 0.0 H -59.5 -54.2 0.0 0.0 0.0 HOH
 9.107
 O
 O
ALA B:437 B:437 0.0 0.0 H -66.4 -47.0 NA NA NA
1lxt 1 P00949 96.97 0.0 X-RAY
 1997-02-12 ALA A:437 A:437 2.0 0.017 H -49.6 -44.6 2.0 0.017 0.0 HOH
 7.962
 O
 O
ALA B:437 B:437 0.0 0.0 H -61.9 -40.9 NA NA NA
1vkl 1 P00949 96.97 0.0 X-RAY
 1997-01-11 ALA A:437 A:437 0.0 0.0 H -59.8 -49.6 0.0 0.0 0.0 HOH
 7.493
 O
 O
ALA B:437 B:437 0.0 0.0 H -69.5 -42.2 NA NA NA
3pmg 1 P00949 96.97 0.0 X-RAY
 1995-12-07 ALA A:437 A:437 0.0 0.0 H -50.5 -58.7 NA NA NA
ALA B:437 B:437 0.0 0.0 H -66.6 -40.1 0.0 0.0 0.0 HOH
 5.312
 N
 H2
6sno 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ALA A:459 A:456 0.0 0.0 H -68.4 -42.4 0.0 0.0 0.0 HOH
 8.687
 O
 O
6snp 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ALA A:459 A:456 0.0 0.0 H -69.8 -46.3 0.0 0.0 0.0
6snq 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ALA A:459 A:456 0.0 0.0 H -68.7 -43.5 0.0 0.0 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p36871-f1 1 P36871 100.0 0.0 ALA A:438 A:438 0.0 0.0 H -64.6 -44.4