Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 64117388 . G A CCDS625.1:NM_002633.2:c.1329aaG>aaA_NP_002624.2:p.443K>K Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5epc 1 P36871 100.0 0.0 X-RAY
 2016-04-27 LYS A:466 A:443 56.0 NA H -61.0 -47.3 56.0 NA NA HOH
 2.899
 O
 O
LYS B:466 B:443 55.0 NA H -62.9 -44.9 NA NA NA
6uiq 1 P36871 100.0 0.0 X-RAY
 2020-08-12 LYS A:466 B:443 56.0 NA H -61.0 -42.5 56.0 NA NA HOH
 3.803
 N
 O
LYS B:466 A:443 131.0 0.655 H -63.7 -40.4 NA NA NA
5vin 1 P36871 99.82 0.0 X-RAY
 2018-06-27 LYS A:466 A:443 52.0 NA H -63.4 -44.1 52.0 NA NA HOH
 5.724
 O
 O
LYS B:466 B:443 51.0 NA H -63.1 -46.1 NA NA NA
6uo6 1 P36871 99.82 0.0 X-RAY
 2020-03-04 LYS A:466 A:443 56.0 NA H -64.7 -44.4 56.0 NA NA HOH
 3.168
 O
 O
LYS B:466 B:443 55.0 NA H -64.2 -40.2 NA NA NA
5vg7 1 P36871 99.82 0.0 X-RAY
 2018-06-20 LYS A:445 A:443 133.0 0.665 H -65.1 -41.9 133.0 0.665 0.0 HOH
 2.967
 O
 O
5vg7 2 P36871 99.82 0.0 X-RAY
 2018-06-20 LYS B:445 B:443 151.0 0.755 H -70.7 -35.2 NA NA NA
5f9c 1 P36871 99.82 0.0 X-RAY
 2016-04-27 LYS A:443 A:443 55.0 NA H -63.7 -40.2 55.0 NA NA HOH
 7.729
 O
 O
LYS B:443 B:443 54.0 NA H -67.1 -36.8 NA NA NA
5hsh 1 P36871 99.82 0.0 X-RAY
 2016-04-27 LYS A:443 A:443 56.0 NA H -62.5 -49.2 56.0 NA NA HOH
 5.650
 C
 O
LYS B:443 B:443 56.0 NA H -60.2 -56.4 NA NA NA
5tr2 1 P36871 99.82 0.0 X-RAY
 2017-02-08 LYS A:466 A:443 51.0 NA H -58.0 -43.6 51.0 NA NA HOH
 3.979
 O
 O
LYS B:466 B:443 64.0 NA H -67.8 -26.5 NA NA NA
5jn5 1 P36871 99.82 0.0 X-RAY
 2017-02-08 LYS A:466 A:443 56.0 NA H -67.1 -41.0 56.0 NA NA HOH
 2.765
 O
 O
LYS B:466 B:443 162.0 0.81 H -64.5 -40.5 NA NA NA
5vec 1 P36871 99.82 0.0 X-RAY
 2018-06-27 LYS A:466 A:443 56.0 NA H -62.1 -45.7 56.0 NA NA HOH
 2.895
 O
 O
LYS B:466 B:443 55.0 NA H -68.7 -37.8 NA NA NA
5vbi 1 P36871 99.82 0.0 X-RAY
 2018-06-20 LYS A:466 A:443 55.0 NA H -65.9 -42.6 55.0 NA NA GOL
HOH
 5.416
2.825
 N
O
 O3
O
LYS B:466 B:443 56.0 NA H -62.5 -43.4 NA NA NA
1c47 1 P00949 96.97 0.0 X-RAY
 1999-08-13 LYS A:442 A:442 115.0 0.575 H -68.4 -40.1 115.0 0.575 0.0 HOH
 7.201
 N
 O
LYS B:442 B:442 133.0 0.665 H -63.1 -40.0 133.0 0.665 0.0 HOH
 5.812
 CD
 O
1c4g 1 P00949 96.97 0.0 X-RAY
 1999-08-27 LYS A:442 A:442 166.0 0.83 H -127.7 -3.9 166.0 0.83 0.0 HOH
 7.181
 N
 O
LYS B:442 B:442 125.0 0.625 H -65.0 -47.0 125.0 0.625 0.0 HOH
 6.689
 C
 O
1jdy 1 P00949 96.97 0.0 X-RAY
 1997-03-12 LYS A:442 A:442 116.0 0.58 H -61.8 -39.4 116.0 0.58 0.0 HOH
 9.751
 NZ
 O
LYS B:442 B:442 138.0 0.69 H -57.3 -40.4 NA NA NA
1lxt 1 P00949 96.97 0.0 X-RAY
 1997-02-12 LYS A:442 A:442 116.0 0.58 H -63.3 -46.1 116.0 0.58 0.0 HOH
 6.226
 C
 O
LYS B:442 B:442 140.0 0.7 H -46.5 -43.9 NA NA NA
1vkl 1 P00949 96.97 0.0 X-RAY
 1997-01-11 LYS A:442 A:442 111.0 0.555 H -63.9 -46.8 111.0 0.555 0.0 HOH
 6.654
 C
 O
LYS B:442 B:442 131.0 0.655 H -60.1 -44.4 NA NA NA
3pmg 1 P00949 96.97 0.0 X-RAY
 1995-12-07 LYS A:442 A:442 120.0 0.6 H -64.0 -42.6 NA NA NA
LYS B:442 B:442 135.0 0.675 H -61.7 -44.0 135.0 0.675 0.0 HOH
 5.430
 N
 H2
6sno 1 P36871 93.05 0.0 X-RAY
 2020-04-08 LYS A:464 A:461 142.0 0.71 H -66.2 -52.4 142.0 0.71 0.0 HOH
 9.348
 N
 O
6snp 1 P36871 93.05 0.0 X-RAY
 2020-04-08 LYS A:464 A:461 127.0 0.635 H -75.2 -52.4 127.0 0.635 0.0
6snq 1 P36871 93.05 0.0 X-RAY
 2020-04-08 LYS A:464 A:461 132.0 0.66 H -71.2 -53.2 132.0 0.66 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p36871-f1 1 P36871 100.0 0.0 LYS A:443 A:443 138.0 0.69 H -63.7 -44.3