Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr1 64117398 . G A CCDS625.1:NM_002633.2:c.1339Gcc>Acc_NP_002624.2:p.447A>T Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5epc 1 P36871 100.0 0.0 X-RAY
 2016-04-27 ALA A:470 A:447 69.0 0.6 H -63.9 -42.4 69.0 0.6 0.0 HOH
 3.839
 N
 O
ALA B:470 B:447 67.0 0.583 H -62.6 -38.6 NA NA NA
6uiq 1 P36871 100.0 0.0 X-RAY
 2020-08-12 ALA A:470 B:447 64.0 0.557 H -71.1 -29.6 64.0 0.557 0.0 HOH
 5.262
 N
 O
ALA B:470 A:447 65.0 0.565 H -62.7 -39.2 NA NA NA
5vin 1 P36871 99.82 0.0 X-RAY
 2018-06-27 ALA A:470 A:447 62.0 0.539 H -64.7 -41.2 62.0 0.539 0.0 HOH
 4.922
 CB
 O
ALA B:470 B:447 64.0 0.557 H -64.7 -38.3 NA NA NA
6uo6 1 P36871 99.82 0.0 X-RAY
 2020-03-04 ALA A:470 A:447 67.0 0.583 H -62.8 -43.1 67.0 0.583 0.0 HOH
 3.759
 N
 O
ALA B:470 B:447 69.0 0.6 H -64.8 -35.7 NA NA NA
5vg7 1 P36871 99.82 0.0 X-RAY
 2018-06-20 ALA A:449 A:447 67.0 0.583 H -64.8 -42.4 67.0 0.583 0.0 HOH
 2.649
 O
 O
5vg7 2 P36871 99.82 0.0 X-RAY
 2018-06-20 ALA B:449 B:447 58.0 0.504 H -61.5 -44.3 NA NA NA
5f9c 1 P36871 99.82 0.0 X-RAY
 2016-04-27 ALA A:447 A:447 68.0 0.591 H -57.2 -42.6 68.0 0.591 0.0 HOH
 5.474
 N
 O
ALA B:447 B:447 67.0 0.583 H -58.0 -40.9 NA NA NA
5hsh 1 P36871 99.82 0.0 X-RAY
 2016-04-27 ALA A:447 A:447 67.0 0.583 H -68.8 -30.3 67.0 0.583 0.0 HOH
 7.227
 N
 O
ALA B:447 B:447 65.0 0.565 H -77.3 -31.4 NA NA NA
5tr2 1 P36871 99.82 0.0 X-RAY
 2017-02-08 ALA A:470 A:447 65.0 0.565 H -56.3 -43.9 65.0 0.565 0.0 HOH
 3.223
 CB
 O
ALA B:470 B:447 61.0 0.53 H -66.6 -38.6 NA NA NA
5jn5 1 P36871 99.82 0.0 X-RAY
 2017-02-08 ALA A:470 A:447 67.0 0.583 H -66.8 -41.0 67.0 0.583 0.0 HOH
 2.759
 O
 O
ALA B:470 B:447 70.0 0.609 H -61.8 -37.7 NA NA NA
5vec 1 P36871 99.82 0.0 X-RAY
 2018-06-27 ALA A:470 A:447 67.0 0.583 H -58.4 -41.2 67.0 0.583 0.0 HOH
 3.646
 N
 O
ALA B:470 B:447 64.0 0.557 H -64.3 -36.7 NA NA NA
5vbi 1 P36871 99.82 0.0 X-RAY
 2018-06-20 ALA A:470 A:447 65.0 0.565 H -60.0 -43.6 65.0 0.565 0.0 GOL
HOH
 8.661
3.560
 N
CA
 O3
O
ALA B:470 B:447 66.0 0.574 H -65.9 -37.8 NA NA NA
1c47 1 P00949 96.97 0.0 X-RAY
 1999-08-13 ALA A:446 A:446 65.0 0.565 H -61.7 -40.0 65.0 0.565 0.0 HOH
 9.961
 N
 O
ALA B:446 B:446 70.0 0.609 H -60.5 -38.4 70.0 0.609 0.0 HOH
 7.707
 N
 O
1c4g 1 P00949 96.97 0.0 X-RAY
 1999-08-27 ALA A:446 A:446 62.0 0.539 H 139.6 -60.4 62.0 0.539 0.0 HOH
 9.357
 N
 O
ALA B:446 B:446 72.0 0.626 H -62.2 -31.2 72.0 0.626 0.0 HOH
 5.998
 CB
 O
1jdy 1 P00949 96.97 0.0 X-RAY
 1997-03-12 ALA A:446 A:446 67.0 0.583 H -55.0 -54.4 67.0 0.583 0.0
ALA B:446 B:446 67.0 0.583 H -59.6 -40.7 NA NA NA
1lxt 1 P00949 96.97 0.0 X-RAY
 1997-02-12 ALA A:446 A:446 71.0 0.617 H -59.2 -38.8 71.0 0.617 0.0 HOH
 7.869
 N
 O
ALA B:446 B:446 64.0 0.557 H -64.5 -44.5 NA NA NA
1vkl 1 P00949 96.97 0.0 X-RAY
 1997-01-11 ALA A:446 A:446 68.0 0.591 H -55.9 -50.9 68.0 0.591 0.0 HOH
 8.257
 N
 O
ALA B:446 B:446 69.0 0.6 H -59.3 -45.0 NA NA NA
3pmg 1 P00949 96.97 0.0 X-RAY
 1995-12-07 ALA A:446 A:446 62.0 0.539 H -58.1 -54.5 NA NA NA
ALA B:446 B:446 71.0 0.617 H -59.5 -39.1 71.0 0.617 0.0 HOH
 4.224
 CB
 O
6sno 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ALA A:468 A:465 61.0 0.53 H -58.4 -42.4 61.0 0.53 0.0
6snp 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ALA A:468 A:465 50.0 0.435 H -63.5 -25.4 50.0 0.435 0.0
6snq 1 P36871 93.05 0.0 X-RAY
 2020-04-08 ALA A:468 A:465 57.0 0.496 H -62.3 -37.6 57.0 0.496 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p36871-f1 1 P36871 100.0 0.0 ALA A:447 A:447 69.0 0.6 H -58.2 -40.3