Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64117459 | . | C | A | CCDS625.1:NM_002633.2:c.1400aCt>aAt_NP_002624.2:p.467T>N | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | THR | A:490 | A:467 | 28.0 | 0.2 | E | -113.1 | 128.8 | 28.0 | 0.2 | 0.0 |
HOH |
2.523 |
OG1 |
O |
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| THR | B:490 | B:467 | 27.0 | 0.193 | E | -120.9 | 130.0 | NA | NA | NA | |||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | THR | A:490 | B:467 | 26.0 | 0.186 | E | -114.1 | 131.9 | 26.0 | 0.186 | 0.0 |
HOH |
2.915 |
OG1 |
O |
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| THR | B:490 | A:467 | 36.0 | 0.257 | E | -119.3 | 133.6 | NA | NA | NA | |||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | THR | A:490 | A:467 | 30.0 | 0.214 | E | -111.7 | 130.2 | 30.0 | 0.214 | 0.0 | ||||||
| THR | B:490 | B:467 | 34.0 | NA | E | -119.7 | 128.4 | NA | NA | NA | |||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | THR | A:490 | A:467 | 29.0 | 0.207 | E | -114.0 | 129.1 | 29.0 | 0.207 | 0.0 |
HOH |
2.378 |
OG1 |
O |
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| THR | B:490 | B:467 | 30.0 | 0.214 | E | -123.7 | 131.7 | NA | NA | NA | |||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | THR | A:469 | A:467 | 28.0 | 0.2 | E | -115.8 | 125.4 | 28.0 | 0.2 | 0.0 |
HOH |
2.624 |
OG1 |
O |
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| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | THR | B:469 | B:467 | 27.0 | 0.193 | E | -121.5 | 122.6 | NA | NA | NA | ||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | THR | A:467 | A:467 | 32.0 | 0.229 | E | -125.0 | 135.1 | 32.0 | 0.229 | 0.0 | ||||||
| THR | B:467 | B:467 | 36.0 | 0.257 | E | -122.4 | 138.3 | NA | NA | NA | |||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | THR | A:467 | A:467 | 44.0 | 0.314 | E | -125.6 | 125.1 | 44.0 | 0.314 | 0.0 | ||||||
| THR | B:467 | B:467 | 40.0 | NA | E | -124.6 | 123.3 | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | THR | A:490 | A:467 | 29.0 | 0.207 | E | -124.4 | 130.0 | 29.0 | 0.207 | 0.0 |
HOH |
9.599 |
N |
O |
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| THR | B:490 | B:467 | 30.0 | NA | E | -114.3 | 127.8 | NA | NA | NA | |||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | THR | A:490 | A:467 | 31.0 | 0.221 | E | -115.3 | 128.1 | 31.0 | 0.221 | 0.0 |
HOH |
2.563 |
OG1 |
O |
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| THR | B:490 | B:467 | 55.0 | 0.393 | E | -122.7 | 120.9 | NA | NA | NA | |||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | THR | A:490 | A:467 | 28.0 | 0.2 | E | -114.7 | 122.2 | 28.0 | 0.2 | 0.0 |
HOH |
3.224 |
N |
O |
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| THR | B:490 | B:467 | 28.0 | 0.2 | E | -126.6 | 120.4 | NA | NA | NA | |||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | THR | A:490 | A:467 | 25.0 | 0.179 | E | -116.8 | 127.8 | 25.0 | 0.179 | 0.0 |
HOH |
2.626 |
OG1 |
O |
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| THR | B:490 | B:467 | 33.0 | 0.236 | E | -120.3 | 128.4 | NA | NA | NA | |||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | THR | A:466 | A:466 | 49.0 | 0.35 | E | -87.7 | 126.5 | 49.0 | 0.35 | 0.0 | ||||||
| THR | B:466 | B:466 | 42.0 | 0.3 | E | -99.6 | 118.8 | 42.0 | 0.3 | 0.0 | |||||||||||||
| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | THR | A:466 | A:466 | 84.0 | 0.6 | -53.2 | 153.5 | 84.0 | 0.6 | 0.0 | |||||||
| THR | B:466 | B:466 | 50.0 | 0.357 | E | -96.6 | 120.9 | 50.0 | 0.357 | 0.0 |
HOH |
2.744 |
N |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | THR | A:466 | A:466 | 36.0 | 0.257 | E | -87.9 | 111.2 | 36.0 | 0.257 | 0.0 |
HOH |
3.016 |
N |
O |
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| THR | B:466 | B:466 | 41.0 | 0.293 | E | -103.6 | 122.5 | NA | NA | NA | |||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | THR | A:466 | A:466 | 38.0 | 0.271 | E | -81.8 | 105.0 | 38.0 | 0.271 | 0.0 |
HOH |
3.589 |
N |
O |
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| THR | B:466 | B:466 | 38.0 | 0.271 | -95.9 | 115.9 | NA | NA | NA | ||||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | THR | A:466 | A:466 | 35.0 | 0.25 | E | -98.7 | 114.2 | 35.0 | 0.25 | 0.0 |
HOH |
3.183 |
N |
O |
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| THR | B:466 | B:466 | 46.0 | 0.329 | E | -112.7 | 117.2 | NA | NA | NA | |||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | THR | A:466 | A:466 | 49.0 | 0.35 | E | -95.5 | 123.7 | NA | NA | NA | ||||||
| THR | B:466 | B:466 | 43.0 | 0.307 | E | -111.3 | 122.4 | 43.0 | 0.307 | 0.0 |
HOH |
2.118 |
H |
O |
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| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | THR | A:488 | A:485 | 27.0 | 0.193 | E | -129.9 | 134.0 | 27.0 | 0.193 | 0.0 |
HOH |
9.305 |
O |
O |
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| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | THR | A:488 | A:485 | 28.0 | 0.2 | E | -118.3 | 127.0 | 28.0 | 0.2 | 0.0 | ||||||
| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | THR | A:488 | A:485 | 34.0 | 0.243 | E | -134.5 | 122.0 | 34.0 | 0.243 | 0.0 |
HOH |
9.288 |
N |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | THR | A:467 | A:467 | 31.0 | 0.221 | E | -100.6 | 124.5 | |