Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64117494 | . | C | A | CCDS625.1:NM_002633.2:c.1435Cca>Aca_NP_002624.2:p.479P>T | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | PRO | A:502 | A:479 | 93.0 | 0.641 | T | -72.3 | -8.4 | 93.0 | 0.641 | 0.0 |
HOH |
3.580 |
CG |
O |
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| PRO | B:502 | B:479 | 91.0 | 0.628 | T | -73.8 | -1.7 | NA | NA | NA | |||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | PRO | A:502 | B:479 | 89.0 | 0.614 | T | -70.1 | -5.2 | 89.0 | 0.614 | 0.0 |
HOH |
3.506 |
CG |
O |
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| PRO | B:502 | A:479 | 88.0 | 0.607 | T | -76.2 | -6.2 | NA | NA | NA | |||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | PRO | A:502 | A:479 | 91.0 | 0.628 | T | -73.6 | -9.7 | 91.0 | 0.628 | 0.0 | ||||||
| PRO | B:502 | B:479 | 97.0 | 0.669 | T | -73.7 | -0.7 | NA | NA | NA | |||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | PRO | A:502 | A:479 | 94.0 | 0.648 | T | -74.2 | 2.0 | 94.0 | 0.648 | 0.0 |
HOH |
3.721 |
CG |
O |
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| PRO | B:502 | B:479 | 90.0 | 0.621 | T | -75.8 | -0.1 | NA | NA | NA | |||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | PRO | A:481 | A:479 | 90.0 | 0.621 | T | -74.0 | -7.8 | 90.0 | 0.621 | 0.0 |
HOH |
3.378 |
CD |
O |
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| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | PRO | B:481 | B:479 | 89.0 | 0.614 | T | -78.3 | 0.7 | NA | NA | NA | ||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | PRO | A:479 | A:479 | 91.0 | 0.628 | T | -68.1 | -14.7 | 91.0 | 0.628 | 0.0 |
HOH |
3.503 |
CD |
O |
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| PRO | B:479 | B:479 | 92.0 | 0.634 | T | -70.0 | -13.6 | NA | NA | NA | |||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | PRO | A:479 | A:479 | 100.0 | 0.69 | T | -79.6 | -11.1 | 100.0 | 0.69 | 0.0 |
HOH |
7.401 |
CG |
O |
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| PRO | B:479 | B:479 | 92.0 | 0.634 | T | -81.6 | -13.0 | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | PRO | A:502 | A:479 | 87.0 | 0.6 | T | -79.9 | 10.2 | 87.0 | 0.6 | 0.0 |
HOH |
3.243 |
CD |
O |
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| PRO | B:502 | B:479 | 98.0 | 0.676 | T | -89.6 | 25.5 | NA | NA | NA | |||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | PRO | A:502 | A:479 | 90.0 | 0.621 | T | -73.1 | -7.9 | 90.0 | 0.621 | 0.0 |
HOH |
3.436 |
CG |
O |
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| PRO | B:502 | B:479 | 94.0 | 0.648 | T | -75.1 | -6.8 | NA | NA | NA | |||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | PRO | A:502 | A:479 | 89.0 | 0.614 | T | -75.4 | -1.0 | 89.0 | 0.614 | 0.0 |
HOH |
3.752 |
CD |
O |
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| PRO | B:502 | B:479 | 91.0 | 0.628 | T | -71.7 | -5.3 | NA | NA | NA | |||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | PRO | A:502 | A:479 | 92.0 | 0.634 | T | -76.3 | -6.0 | 92.0 | 0.634 | 0.0 |
HOH |
3.576 |
CG |
O |
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| PRO | B:502 | B:479 | 91.0 | 0.628 | T | -76.1 | -4.0 | NA | NA | NA | |||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | PRO | A:478 | A:478 | 93.0 | 0.641 | T | -63.5 | -10.5 | 93.0 | 0.641 | 0.0 | ||||||
| PRO | B:478 | B:478 | 95.0 | 0.655 | T | -69.8 | -15.4 | 95.0 | 0.655 | 0.0 |
HOH |
8.750 |
CD |
O |
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| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | PRO | A:478 | A:478 | 90.0 | 0.621 | T | -71.2 | -12.3 | 90.0 | 0.621 | 0.0 |
HOH |
8.158 |
CG |
O |
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| PRO | B:478 | B:478 | 90.0 | 0.621 | T | -62.6 | -6.5 | 90.0 | 0.621 | 0.0 |
HOH |
8.448 |
CD |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | PRO | A:478 | A:478 | 87.0 | 0.6 | T | -68.7 | -17.5 | 87.0 | 0.6 | 0.0 |
HOH |
3.173 |
CG |
O |
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| PRO | B:478 | B:478 | 97.0 | 0.669 | S | -75.5 | -17.8 | NA | NA | NA | |||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | PRO | A:478 | A:478 | 92.0 | 0.634 | T | -66.9 | -17.5 | 92.0 | 0.634 | 0.0 |
HOH |
3.117 |
CG |
O |
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| PRO | B:478 | B:478 | 91.0 | 0.628 | S | -86.2 | -19.0 | NA | NA | NA | |||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | PRO | A:478 | A:478 | 96.0 | 0.662 | T | -73.1 | -15.5 | 96.0 | 0.662 | 0.0 |
HOH |
3.132 |
CG |
O |
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| PRO | B:478 | B:478 | 94.0 | 0.648 | T | -74.9 | -28.0 | NA | NA | NA | |||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | PRO | A:478 | A:478 | 95.0 | 0.655 | T | -65.7 | -28.7 | NA | NA | NA | ||||||
| PRO | B:478 | B:478 | 92.0 | 0.634 | T | -65.0 | -18.1 | 92.0 | 0.634 | 0.0 |
HOH |
3.524 |
O |
H1 |
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| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | PRO | A:500 | A:497 | 86.0 | 0.593 | T | -84.3 | 12.8 | 86.0 | 0.593 | 0.0 |
HOH |
8.333 |
CG |
O |
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| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | PRO | A:500 | A:497 | 83.0 | 0.572 | T | -81.9 | 2.5 | 83.0 | 0.572 | 0.0 |
HOH |
8.642 |
N |
O |
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| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | PRO | A:500 | A:497 | 79.0 | 0.545 | T | -83.4 | 9.8 | 79.0 | 0.545 | 0.0 |
HOH |
3.869 |
CD |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | PRO | A:479 | A:479 | 65.0 | 0.448 | T | -77.3 | 1.4 | |