Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64120033 | . | C | A | CCDS625.1:NM_002633.2:c.1495Cga>Aga_NP_002624.2:p.499R>R | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | ARG | A:522 | A:499 | 17.0 | 0.076 | E | -146.8 | 151.0 | 17.0 | 0.076 | 0.0 |
SO4 HOH |
7.046 2.867 |
CD NE |
O1 O |
||
| ARG | B:522 | B:499 | 18.0 | 0.08 | E | -146.1 | 149.3 | NA | NA | NA | |||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | ARG | A:522 | B:499 | 14.0 | 0.062 | E | -146.9 | 148.1 | 14.0 | 0.062 | 0.0 |
HOH |
3.016 |
NE |
O |
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| ARG | B:522 | A:499 | 17.0 | 0.076 | E | -148.3 | 150.7 | NA | NA | NA | |||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ARG | A:522 | A:499 | 24.0 | 0.107 | E | -148.2 | 149.9 | 24.0 | 0.107 | 0.0 |
HOH |
2.443 |
NE |
O |
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| ARG | B:522 | B:499 | 28.0 | 0.124 | E | -145.2 | 146.1 | NA | NA | NA | |||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | ARG | A:522 | A:499 | 17.0 | 0.076 | E | -145.8 | 150.9 | 17.0 | 0.076 | 0.0 |
SO4 HOH |
7.114 2.994 |
CD NE |
O1 O |
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| ARG | B:522 | B:499 | 17.0 | 0.076 | E | -139.7 | 148.3 | NA | NA | NA | |||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ARG | A:501 | A:499 | 18.0 | 0.08 | E | -147.7 | 154.1 | 18.0 | 0.08 | 0.0 |
SO4 GOL HOH |
7.012 9.299 2.946 |
CD CG NE |
O2 O3 O |
||
| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ARG | B:501 | B:499 | 16.0 | 0.071 | E | -148.8 | 154.0 | NA | NA | NA | ||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ARG | A:499 | A:499 | 19.0 | 0.084 | E | -145.6 | 144.2 | 19.0 | 0.084 | 0.0 |
HOH |
2.971 |
NE |
O |
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| ARG | B:499 | B:499 | 18.0 | 0.08 | E | -143.1 | 144.9 | NA | NA | NA | |||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | ARG | A:499 | A:499 | 22.0 | 0.098 | E | -150.8 | 156.3 | 22.0 | 0.098 | 0.0 |
HOH |
2.894 |
NE |
O |
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| ARG | B:499 | B:499 | 35.0 | 0.156 | E | -151.4 | 159.8 | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ARG | A:522 | A:499 | 20.0 | 0.089 | E | -139.4 | 158.1 | 20.0 | 0.089 | 0.0 |
HOH |
6.305 |
NE |
O |
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| ARG | B:522 | B:499 | 23.0 | 0.102 | E | -147.8 | 172.2 | NA | NA | NA | |||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | ARG | A:522 | A:499 | 16.0 | 0.071 | E | -148.2 | 151.0 | 16.0 | 0.071 | 0.0 |
HOH |
2.983 |
NH1 |
O |
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| ARG | B:522 | B:499 | 17.0 | 0.076 | E | -146.9 | 157.8 | NA | NA | NA | |||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | ARG | A:522 | A:499 | 17.0 | 0.076 | E | -151.0 | 149.1 | 17.0 | 0.076 | 0.0 |
SO4 HOH |
7.145 2.836 |
CD NE |
O2 O |
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| ARG | B:522 | B:499 | 16.0 | 0.071 | E | -145.2 | 146.5 | NA | NA | NA | |||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | ARG | A:522 | A:499 | 19.0 | 0.084 | E | -147.8 | 150.7 | 19.0 | 0.084 | 0.0 |
SO4 GOL HOH |
7.130 9.236 2.930 |
CD CG NE |
O2 O3 O |
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| ARG | B:522 | B:499 | 18.0 | 0.08 | E | -146.2 | 145.9 | NA | NA | NA | |||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | ARG | A:498 | A:498 | 13.0 | 0.058 | E | -155.3 | 150.4 | 13.0 | 0.058 | 0.0 |
HOH |
3.856 |
CB |
O |
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| ARG | B:498 | B:498 | 14.0 | 0.062 | E | -138.0 | 154.2 | 14.0 | 0.062 | 0.0 |
HOH |
3.476 |
CD |
O |
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| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | ARG | A:498 | A:498 | 16.0 | 0.071 | E | -164.0 | 149.8 | 16.0 | 0.071 | 0.0 |
HOH |
2.761 |
NH1 |
O |
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| ARG | B:498 | B:498 | 13.0 | 0.058 | E | -134.4 | 146.5 | 13.0 | 0.058 | 0.0 |
HOH |
3.607 |
CD |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | ARG | A:498 | A:498 | 13.0 | 0.058 | E | -140.7 | 156.4 | 13.0 | 0.058 | 0.0 |
HOH |
2.983 |
NH1 |
O |
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| ARG | B:498 | B:498 | 17.0 | 0.076 | E | -152.3 | 151.9 | NA | NA | NA | |||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | ARG | A:498 | A:498 | 18.0 | 0.08 | E | -122.6 | 168.5 | 18.0 | 0.08 | 0.0 |
HOH |
2.787 |
NH1 |
O |
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| ARG | B:498 | B:498 | 17.0 | 0.076 | E | -140.8 | 168.3 | NA | NA | NA | |||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | ARG | A:498 | A:498 | 15.0 | 0.067 | E | -150.6 | 149.7 | 15.0 | 0.067 | 0.0 |
HOH |
2.753 |
NH1 |
O |
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| ARG | B:498 | B:498 | 17.0 | 0.076 | E | -152.4 | 148.3 | NA | NA | NA | |||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | ARG | A:498 | A:498 | 15.0 | 0.067 | E | -149.1 | 170.5 | NA | NA | NA | ||||||
| ARG | B:498 | B:498 | 15.0 | 0.067 | E | -153.3 | 151.6 | 15.0 | 0.067 | 0.0 |
HOH |
2.032 |
HE |
O |
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| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ARG | A:520 | A:517 | 18.0 | 0.08 | E | -130.9 | 140.3 | 18.0 | 0.08 | 0.0 |
HOH |
8.509 |
NH1 |
O |
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| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ARG | A:520 | A:517 | 19.0 | 0.084 | E | -135.2 | 137.6 | 19.0 | 0.084 | 0.0 | ||||||
| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | ARG | A:520 | A:517 | 20.0 | 0.089 | E | -135.0 | 138.9 | 20.0 | 0.089 | 0.0 |
HOH |
2.860 |
NH1 |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | ARG | A:499 | A:499 | 18.0 | 0.08 | E | -144.2 | 147.4 | |