Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr1 | 64120039 | . | G | A | CCDS625.1:NM_002633.2:c.1501Gtc>Atc_NP_002624.2:p.501V>I | Homo sapiens phosphoglucomutase 1 (PGM1), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5epc | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2016-04-27 | VAL | A:524 | A:501 | 3.0 | 0.019 | E | -130.9 | 131.1 | 3.0 | 0.019 | 0.0 |
SO4 GOL HOH |
9.753 8.648 5.622 |
CG2 CG1 CG2 |
O1 O1 O |
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| VAL | B:524 | B:501 | 3.0 | 0.019 | E | -130.3 | 130.3 | NA | NA | NA | |||||||||||||
| 6uiq | 1 | P36871 | 100.0 | 0.0 |
X-RAY |
2020-08-12 | VAL | A:524 | B:501 | 2.0 | 0.013 | E | -133.0 | 132.6 | 2.0 | 0.013 | 0.0 |
G6P HOH |
9.806 5.548 |
CG1 CG2 |
O3P O |
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| VAL | B:524 | A:501 | 2.0 | 0.013 | E | -130.2 | 132.8 | NA | NA | NA | |||||||||||||
| 5vin | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | VAL | A:524 | A:501 | 4.0 | 0.026 | E | -132.8 | 130.4 | 4.0 | 0.026 | 0.0 |
HOH |
8.451 |
CG1 |
O |
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| VAL | B:524 | B:501 | 4.0 | NA | E | -130.1 | 130.3 | NA | NA | NA | |||||||||||||
| 6uo6 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2020-03-04 | VAL | A:524 | A:501 | 2.0 | 0.013 | E | -129.6 | 135.4 | 2.0 | 0.013 | 0.0 |
SO4 SO4 HOH |
9.709 9.927 5.611 |
CG2 CG1 CG2 |
O1 O4 O |
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| VAL | B:524 | B:501 | 2.0 | 0.013 | E | -130.5 | 131.5 | NA | NA | NA | |||||||||||||
| 5vg7 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | VAL | A:503 | A:501 | 2.0 | 0.013 | E | -131.5 | 130.6 | 2.0 | 0.013 | 0.0 |
SO4 HOH |
9.738 5.552 |
CG2 CG2 |
O2 O |
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| 5vg7 | 2 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | VAL | B:503 | B:501 | 3.0 | 0.019 | E | -131.9 | 130.2 | NA | NA | NA | ||||||
| 5f9c | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | VAL | A:501 | A:501 | 2.0 | 0.013 | E | -128.2 | 134.4 | 2.0 | 0.013 | 0.0 |
SO4 HOH |
9.817 8.097 |
CG1 CG2 |
O4 O |
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| VAL | B:501 | B:501 | 2.0 | 0.013 | E | -126.1 | 133.0 | NA | NA | NA | |||||||||||||
| 5hsh | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2016-04-27 | VAL | A:501 | A:501 | 4.0 | NA | E | -126.6 | 133.8 | 4.0 | NA | NA |
HOH |
8.756 |
C |
O |
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| VAL | B:501 | B:501 | 8.0 | NA | E | -126.8 | 129.2 | NA | NA | NA | |||||||||||||
| 5tr2 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | VAL | A:524 | A:501 | 3.0 | 0.019 | E | -136.3 | 130.8 | 3.0 | 0.019 | 0.0 |
HOH |
8.594 |
C |
O |
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| VAL | B:524 | B:501 | 2.0 | 0.013 | E | -138.4 | 130.4 | NA | NA | NA | |||||||||||||
| 5jn5 | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2017-02-08 | VAL | A:524 | A:501 | 2.0 | 0.013 | E | -129.7 | 131.4 | 2.0 | 0.013 | 0.0 |
SO4 HOH |
9.847 5.665 |
CG1 CG2 |
O4 O |
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| VAL | B:524 | B:501 | 3.0 | 0.019 | E | -129.2 | 136.7 | NA | NA | NA | |||||||||||||
| 5vec | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-27 | VAL | A:524 | A:501 | 3.0 | 0.019 | E | -140.5 | 132.3 | 3.0 | 0.019 | 0.0 |
HOH |
5.684 |
CG2 |
O |
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| VAL | B:524 | B:501 | 2.0 | 0.013 | E | -124.2 | 130.2 | NA | NA | NA | |||||||||||||
| 5vbi | 1 | P36871 | 99.82 | 0.0 |
X-RAY |
2018-06-20 | VAL | A:524 | A:501 | 3.0 | 0.019 | E | -132.2 | 130.2 | 3.0 | 0.019 | 0.0 |
SO4 GOL GOL HOH |
9.640 7.950 8.540 5.630 |
CG2 CG1 CG1 CG2 |
O2 O1 O1 O |
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| VAL | B:524 | B:501 | 2.0 | 0.013 | E | -130.9 | 132.1 | NA | NA | NA | |||||||||||||
| 1c47 | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-13 | ILE | A:500 | A:500 | 0.0 | 0.0 | E | -123.0 | 133.8 | 0.0 | 0.0 | 0.0 |
HOH |
6.631 |
CD1 |
O |
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| ILE | B:500 | B:500 | 0.0 | 0.0 | E | -119.6 | 139.2 | 0.0 | 0.0 | 0.0 |
HOH |
7.038 |
CG1 |
O |
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| 1c4g | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1999-08-27 | ILE | A:500 | A:500 | 1.0 | 0.006 | E | -80.0 | 79.4 | 1.0 | 0.006 | 0.0 |
HOH |
5.939 |
CD1 |
O |
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| ILE | B:500 | B:500 | 0.0 | 0.0 | E | -125.7 | 133.2 | 0.0 | 0.0 | 0.0 |
HOH |
6.304 |
CD1 |
O |
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| 1jdy | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-03-12 | ILE | A:500 | A:500 | 0.0 | 0.0 | E | -116.5 | 135.0 | 0.0 | 0.0 | 0.0 |
SO4 HOH |
9.948 5.799 |
CG2 CD1 |
O3 O |
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| ILE | B:500 | B:500 | 0.0 | 0.0 | E | -125.5 | 135.8 | NA | NA | NA | |||||||||||||
| 1lxt | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-02-12 | ILE | A:500 | A:500 | 0.0 | 0.0 | E | -118.5 | 133.8 | 0.0 | 0.0 | 0.0 |
HOH |
5.317 |
CD1 |
O |
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| ILE | B:500 | B:500 | 0.0 | 0.0 | E | -132.8 | 131.9 | NA | NA | NA | |||||||||||||
| 1vkl | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1997-01-11 | ILE | A:500 | A:500 | 0.0 | 0.0 | E | -124.7 | 126.7 | 0.0 | 0.0 | 0.0 |
HOH |
5.304 |
CD1 |
O |
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| ILE | B:500 | B:500 | 0.0 | 0.0 | E | -129.0 | 139.1 | NA | NA | NA | |||||||||||||
| 3pmg | 1 | P00949 | 96.97 | 0.0 |
X-RAY |
1995-12-07 | ILE | A:500 | A:500 | 0.0 | 0.0 | E | -123.5 | 142.9 | NA | NA | NA | ||||||
| ILE | B:500 | B:500 | 0.0 | 0.0 | E | -130.6 | 139.8 | 0.0 | 0.0 | 0.0 |
HOH |
5.730 |
CG1 |
O |
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| 6sno | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | VAL | A:522 | A:519 | 1.0 | 0.006 | E | -114.9 | 134.8 | 1.0 | 0.006 | 0.0 |
G1P HOH |
9.613 6.239 |
CG1 CG1 |
O1P O |
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| 6snp | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | VAL | A:522 | A:519 | 2.0 | 0.013 | E | -120.9 | 136.7 | 2.0 | 0.013 | 0.0 | ||||||
| 6snq | 1 | P36871 | 93.05 | 0.0 |
X-RAY |
2020-04-08 | VAL | A:522 | A:519 | 1.0 | 0.006 | E | -119.1 | 137.6 | 1.0 | 0.006 | 0.0 |
HOH |
5.874 |
CG2 |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p36871-f1 | 1 | P36871 | 100.0 | 0.0 | VAL | A:501 | A:501 | 3.0 | 0.019 | E | -125.4 | 135.2 | |